What's Changed ability to have several features in rnaseq/rnadiff pipeline by @cokelaer in https://github.com/sequana/sequana/pull/761 add fisher test in variant calling by @cokelaer in https://github.com/sequana/sequana/pull/762 Update rnadiff to use several features add fisher for variant calling pinning requirements by @cokelaer in https://github.com/sequana/sequana/pull/763 rename master into main by @cokelaer in https://github.com/sequana/sequana/pull/767 Full Changelog: https://github.com/sequana/sequana/compare/v0.14.2...v0.14.
What's Changed add fasta_and_gff_correction and codon modules by @cokelaer in https://github.com/se...
What's Changed Fixing condition column name selection when filtering by mean by groups by @khourhin...
VariantsOfInterest - fixed a bug which removes NAs from mean frequency calculation ...
What's Changed ability to have several features in rnaseq/rnadiff pipeline by @cokelaer in https://...
What's Changed Remove the ability to use existing snpeff DB by @cokelaer in https://github.com/sequ...
What's Changed Add new modules in relation with chipseq pipelines by @cokelaer in https://github.co...
What's Changed refactorisation to include containers and latest wrappers Full Changelog: https://g...
What's Changed Adding table export as csv for kegg and GO enrichment by @khourhin in https://github...
What's Changed Fix strand balance automatic selection bug by @cokelaer in https://github.com/sequan...
What's Changed move containers in the config file by @cokelaer in https://github.com/sequana/rnaseq...
What's Changed Fix options not used in star_mapping by @cokelaer in https://github.com/sequana/rnas...
What's Changed Update kegg/panther to handle special cases by @cokelaer in https://github.com/sequa...
What's Changed add sequana_wrappers in the PipelineManagerDirectory by @cokelaer in https://github....
In version 3.0.0 the RNA-seq pipeline was brought up to date with the GATK best practices pipeline....
What's Changed Fixes singularity-args with profiles by @cokelaer in https://github.com/sequana/sequ...
What's Changed add fasta_and_gff_correction and codon modules by @cokelaer in https://github.com/se...
What's Changed Fixing condition column name selection when filtering by mean by groups by @khourhin...
VariantsOfInterest - fixed a bug which removes NAs from mean frequency calculation ...
What's Changed ability to have several features in rnaseq/rnadiff pipeline by @cokelaer in https://...
What's Changed Remove the ability to use existing snpeff DB by @cokelaer in https://github.com/sequ...
What's Changed Add new modules in relation with chipseq pipelines by @cokelaer in https://github.co...
What's Changed refactorisation to include containers and latest wrappers Full Changelog: https://g...
What's Changed Adding table export as csv for kegg and GO enrichment by @khourhin in https://github...
What's Changed Fix strand balance automatic selection bug by @cokelaer in https://github.com/sequan...
What's Changed move containers in the config file by @cokelaer in https://github.com/sequana/rnaseq...
What's Changed Fix options not used in star_mapping by @cokelaer in https://github.com/sequana/rnas...
What's Changed Update kegg/panther to handle special cases by @cokelaer in https://github.com/sequa...
What's Changed add sequana_wrappers in the PipelineManagerDirectory by @cokelaer in https://github....
In version 3.0.0 the RNA-seq pipeline was brought up to date with the GATK best practices pipeline....
What's Changed Fixes singularity-args with profiles by @cokelaer in https://github.com/sequana/sequ...
What's Changed add fasta_and_gff_correction and codon modules by @cokelaer in https://github.com/se...
What's Changed Fixing condition column name selection when filtering by mean by groups by @khourhin...
VariantsOfInterest - fixed a bug which removes NAs from mean frequency calculation ...