It is crucial for molecular dynamics simulations of biomembranes that the force field parameters give a realistic model of the membrane behavior. In this study, we examined the OPLS3e force field for the carbon–hydrogen order parameters SCH of POPC (1-palmitoyl-2- oleoylphosphatidylcholine) lipid bilayers at varying hydration conditions and ion concentrations. The results show that OPLS3e behaves similarly to the CHARMM36 force field and relatively accurately follows the experimentally measured SCH for the lipid headgroup, the glycerol backbone, and the acyl tails. Thus, OPLS3e is a good choice for POPC bilayer simulations under many biologically relevant conditions. The exception are systems with an abundancy of ions, as similarly to most ...
AbstractExperimental evidence indicates that, under some circumstances, “surrogate” molecules may pl...
The aim of this work was to answer the question of whether the general amber force field (GAFF) is f...
Molecular dynamics simulations of fully hydrated pure bilayers of four widely studied phospholipids,...
It is crucial for molecular dynamics simulations of biomembranes that the force field parameters giv...
It is crucial for molecular dynamics simulations of biomembranes that the force field parameters giv...
International audience1-Palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine (POPC),a lipid comprising a s...
International audience1-Palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine (POPC),a lipid comprising a s...
The extent to which current force fields faithfully reproduce conformational properties of lipids in...
International audience1-Palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine (POPC),a lipid comprising a s...
International audience1-Palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine (POPC),a lipid comprising a s...
International audience1-Palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine (POPC),a lipid comprising a s...
International audience1-Palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine (POPC),a lipid comprising a s...
Classical molecular dynamics simulations of various mixtures of POPC:POPS lipid bilayers in water so...
The sensitivity of the structure and dynamics of a fully hydrated pure bilayer of 1,2-dipalmitoyl-sn...
The effect of ion binding on the structural, mechanical, dynamic and electrostatic properties of a 1...
AbstractExperimental evidence indicates that, under some circumstances, “surrogate” molecules may pl...
The aim of this work was to answer the question of whether the general amber force field (GAFF) is f...
Molecular dynamics simulations of fully hydrated pure bilayers of four widely studied phospholipids,...
It is crucial for molecular dynamics simulations of biomembranes that the force field parameters giv...
It is crucial for molecular dynamics simulations of biomembranes that the force field parameters giv...
International audience1-Palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine (POPC),a lipid comprising a s...
International audience1-Palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine (POPC),a lipid comprising a s...
The extent to which current force fields faithfully reproduce conformational properties of lipids in...
International audience1-Palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine (POPC),a lipid comprising a s...
International audience1-Palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine (POPC),a lipid comprising a s...
International audience1-Palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine (POPC),a lipid comprising a s...
International audience1-Palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine (POPC),a lipid comprising a s...
Classical molecular dynamics simulations of various mixtures of POPC:POPS lipid bilayers in water so...
The sensitivity of the structure and dynamics of a fully hydrated pure bilayer of 1,2-dipalmitoyl-sn...
The effect of ion binding on the structural, mechanical, dynamic and electrostatic properties of a 1...
AbstractExperimental evidence indicates that, under some circumstances, “surrogate” molecules may pl...
The aim of this work was to answer the question of whether the general amber force field (GAFF) is f...
Molecular dynamics simulations of fully hydrated pure bilayers of four widely studied phospholipids,...