List of candidate genes annotated in an interval of 500Kb (250 Kb up- and downstream) for the individual SNPs with genotypic TRD effect.

23andMe SNPs for which SNPedia annotations are available

Gustavo Glusman (5925)
Mike Cariaso (98498)
Rafael Jimenez (98499)
Daniel Swan (98500)
Bastian Greshake (98496)
Jong Bhak (64076)
Darren W Logan (98497)
Manuel Corpas (97270)

July 2012

Each file contains all SNPs in the individual matching an annotated SNP in SNPedia. SNPedia annot...

Detailed information for the 16 significant candidate genes that were also inferred genes.

Lei Chen (54296)
Chen Chu (687913)
Xiangyin Kong (48989)
Tao Huang (110613)
Yu-Dong Cai (133116)

January 2015

Detailed information for the 16 significant candidate genes that were also inferred genes.</p

Genes within the two 500 kb bins that reached “suggestive” significance in the ROH mapping analysis.

Matthew C. Keller (171356)
Matthew A. Simonson (171361)
Stephan Ripke (156076)
Ben M. Neale (171367)
Pablo V. Gejman (171372)
Daniel P. Howrigan (171378)
Sang Hong Lee (77173)
Todd Lencz (52220)
Douglas F. Levinson (171384)
Patrick F. Sullivan (143608)
The Schizophrenia Psychiatric Genome-Wide Association Study Consortium (171388)

April 2012

Genes within the two 500 kb bins that reached “suggestive” significance in the ROH mapping analys...

List of candidate genes annotated in an interval of 500Kb (250 Kb up- and downstream) for the individual SNPs with allelic TRD effect.

Nora Laseca (12098801)
Ángela Cánovas (3391583)
Mercedes Valera (12098804)
Samir Id-Lahoucine (5015405)
Davinia I. Perdomo-González (16806857)
Pablo A. S. Fonseca (4022972)
Sebastián Demyda-Peyrás (5492789)
Antonio Molina (537591)

August 2023

List of candidate genes annotated in an interval of 500Kb (250 Kb up- and downstream) for the indivi...

List of SNPs including Gene ID, accession number, mutant allele frequency and haplotype details which were detected by high depth next generation sequencing and selected for further analysis.

Damien Coté (5586764)
Alex Eustace (5515580)
Sinead Toomey (198671)
Mattia Cremona (4844478)
Malgorzata Milewska (754246)
Simon Furney (3619658)
Aoife Carr (4283014)
Joanna Fay (4283017)
Elaine Kay (414758)
Susan Kennedy (424972)
John Crown (112358)
Bryan Hennessy (590686)
Stephen Madden (2611069)

August 2018

List of SNPs including Gene ID, accession number, mutant allele frequency and haplotype details w...

Functional candidate genes identified in the regions of SNPs with TRD effect related to fertility and reproductive processes.

Nora Laseca (12098801)
Ángela Cánovas (3391583)
Mercedes Valera (12098804)
Samir Id-Lahoucine (5015405)
Davinia I. Perdomo-González (16806857)
Pablo A. S. Fonseca (4022972)
Sebastián Demyda-Peyrás (5492789)
Antonio Molina (537591)

August 2023

Functional candidate genes identified in the regions of SNPs with TRD effect related to fertility an...

List of candidate genes (genes to prioritize) obtained from DAPPLE analysis of significant plus suggestive SNPs.

Giammario Ragnedda (125814)
Giulio Disanto (125817)
Gavin Giovannoni (125820)
George C. Ebers (125822)
Stefano Sotgiu (125824)
Sreeram V. Ramagopalan (125826)

October 2012

List of candidate genes (genes to prioritize) obtained from DAPPLE analysis of significant plus s...

Biological functions of genes surrounding the 603 top associated SNPs. Results from GeneTrail.

Malin Östensson (440869)
Caroline Montén (440870)
Jonas Bacelis (440871)
Audur H. Gudjonsdottir (440872)
Svetlana Adamovic (440873)
Johan Ek (440874)
Henry Ascher (440875)
Elisabet Pollak (440876)
Henrik Arnell (440877)
Lars Browaldh (440878)
Daniel Agardh (440879)
Jan Wahlström (440880)
Staffan Nilsson (112787)
Åsa Torinsson-Naluai (440881)

August 2013

A total of 823 genes surrounding the 603 top associated SNPs were put into the GeneTrail software...

The top 50 associated SNPs discovered by the individual SNP approach with the corresponding haplotype blocks.

Mohamed N. Saad (765396)
Mai S. Mabrouk (765397)
Ayman M. Eldeib (765398)
Olfat G. Shaker (713168)

December 2018

The top 50 associated SNPs discovered by the individual SNP approach with the corresponding haplotyp...

Number of variants and genotyping rates for SNP datasets generated in this study.

John Soghigian (3418565)
Theodore G. Andreadis (257136)
Goudarz Molaei (790980)

August 2018

Number of variants and genotyping rates for SNP datasets generated in this study.</p

Top GWAS SNP hits in genes of functional interest for T2D, organized by chromosome.

Denise Anderson (125432)
Heather J. Cordell (173189)
Michaela Fakiola (73496)
Richard W. Francis (155442)
Genevieve Syn (700992)
Elizabeth S. H. Scaman (125424)
Elizabeth Davis (304899)
Simon J. Miles (700993)
Toby McLeay (700994)
Sarra E. Jamieson (125443)
Jenefer M. Blackwell (125437)

March 2015

Data analyzed in GenABEL using genotyped or 1000G imputed data for all individuals with doctor-di...

Annotation of homozygous SNPs between TC-reg-2008 and WT.

Di Zhang (197959)
Zhenhui Wang (560943)
Ningning Wang (560944)
Yang Gao (18005)
Ying Liu (18461)
Ying Wu (19057)
Yan Bai (28807)
Zhibin Zhang (102722)
Xiuyun Lin (136096)
Yuzhu Dong (210115)
Xiufang Ou (136093)
Chunming Xu (136095)
Bao Liu (136109)

May 2014

(A) Number and percentile of homozygous SNPs between TC-reg-2008 and WT were located in genic and...

Candidate genes and SNPs, VNTR and indel loci identified and selected for this study.

Elvis Ofon (4059550)
Harry Noyes (121595)
Vincent Ebo’o Eyanga (6504323)
Flobert Njiokou (208646)
Mathurin Koffi (301501)
Pythagore Fogue (4540180)
Christiane Hertz-Fowler (243178)
Annette MacLeod (12779)
Enock Matovu (150725)
Gustave Simo (428002)

April 2019

Candidate genes and SNPs, VNTR and indel loci identified and selected for this study.</p

The list of detected genes with direct or inverted repeats of 17 or more nucleotides in length.

Michal Strouhal (48850)
Lenka Mikalová (133591)
Jan Haviernik (5843138)
Sascha Knauf (111363)
Sylvia Bruisten (438918)
Gerda T. Noordhoek (5843141)
Jan Oppelt (3815176)
Darina Čejková (133588)
David Šmajs (48851)

October 2018

The list of detected genes with direct or inverted repeats of 17 or more nucleotides in length.</p

SNP sequences and GENALEX file

Hanne De Kort (3248907)
Katrien Vandepitte (424035)
Joachim Mergeay (196885)
Kristine Vander Mijnsbrugge (3291585)
Olivier Honnay (387662)

November 2016

Sequences of the 250 SNPs (together with their functional annotations) are available in tab 1 of the...

23andMe SNPs for which SNPedia annotations are available

Gustavo Glusman (5925)
Mike Cariaso (98498)
Rafael Jimenez (98499)
Daniel Swan (98500)
Bastian Greshake (98496)
Jong Bhak (64076)
Darren W Logan (98497)
Manuel Corpas (97270)

July 2012

Each file contains all SNPs in the individual matching an annotated SNP in SNPedia. SNPedia annot...

Detailed information for the 16 significant candidate genes that were also inferred genes.

Lei Chen (54296)
Chen Chu (687913)
Xiangyin Kong (48989)
Tao Huang (110613)
Yu-Dong Cai (133116)

January 2015

Detailed information for the 16 significant candidate genes that were also inferred genes.</p

Genes within the two 500 kb bins that reached “suggestive” significance in the ROH mapping analysis.

Matthew C. Keller (171356)
Matthew A. Simonson (171361)
Stephan Ripke (156076)
Ben M. Neale (171367)
Pablo V. Gejman (171372)
Daniel P. Howrigan (171378)
Sang Hong Lee (77173)
Todd Lencz (52220)
Douglas F. Levinson (171384)
Patrick F. Sullivan (143608)
The Schizophrenia Psychiatric Genome-Wide Association Study Consortium (171388)

April 2012

Genes within the two 500 kb bins that reached “suggestive” significance in the ROH mapping analys...

List of candidate genes annotated in an interval of 500Kb (250 Kb up- and downstream) for the individual SNPs with allelic TRD effect.

Nora Laseca (12098801)
Ángela Cánovas (3391583)
Mercedes Valera (12098804)
Samir Id-Lahoucine (5015405)
Davinia I. Perdomo-González (16806857)
Pablo A. S. Fonseca (4022972)
Sebastián Demyda-Peyrás (5492789)
Antonio Molina (537591)

August 2023

List of candidate genes annotated in an interval of 500Kb (250 Kb up- and downstream) for the indivi...

List of SNPs including Gene ID, accession number, mutant allele frequency and haplotype details which were detected by high depth next generation sequencing and selected for further analysis.

Damien Coté (5586764)
Alex Eustace (5515580)
Sinead Toomey (198671)
Mattia Cremona (4844478)
Malgorzata Milewska (754246)
Simon Furney (3619658)
Aoife Carr (4283014)
Joanna Fay (4283017)
Elaine Kay (414758)
Susan Kennedy (424972)
John Crown (112358)
Bryan Hennessy (590686)
Stephen Madden (2611069)

August 2018

List of SNPs including Gene ID, accession number, mutant allele frequency and haplotype details w...

Functional candidate genes identified in the regions of SNPs with TRD effect related to fertility and reproductive processes.

Nora Laseca (12098801)
Ángela Cánovas (3391583)
Mercedes Valera (12098804)
Samir Id-Lahoucine (5015405)
Davinia I. Perdomo-González (16806857)
Pablo A. S. Fonseca (4022972)
Sebastián Demyda-Peyrás (5492789)
Antonio Molina (537591)

August 2023

Functional candidate genes identified in the regions of SNPs with TRD effect related to fertility an...

List of candidate genes (genes to prioritize) obtained from DAPPLE analysis of significant plus suggestive SNPs.

Giammario Ragnedda (125814)
Giulio Disanto (125817)
Gavin Giovannoni (125820)
George C. Ebers (125822)
Stefano Sotgiu (125824)
Sreeram V. Ramagopalan (125826)

October 2012

List of candidate genes (genes to prioritize) obtained from DAPPLE analysis of significant plus s...

Biological functions of genes surrounding the 603 top associated SNPs. Results from GeneTrail.

Malin Östensson (440869)
Caroline Montén (440870)
Jonas Bacelis (440871)
Audur H. Gudjonsdottir (440872)
Svetlana Adamovic (440873)
Johan Ek (440874)
Henry Ascher (440875)
Elisabet Pollak (440876)
Henrik Arnell (440877)
Lars Browaldh (440878)
Daniel Agardh (440879)
Jan Wahlström (440880)
Staffan Nilsson (112787)
Åsa Torinsson-Naluai (440881)

August 2013

A total of 823 genes surrounding the 603 top associated SNPs were put into the GeneTrail software...

The top 50 associated SNPs discovered by the individual SNP approach with the corresponding haplotype blocks.

Mohamed N. Saad (765396)
Mai S. Mabrouk (765397)
Ayman M. Eldeib (765398)
Olfat G. Shaker (713168)

December 2018

The top 50 associated SNPs discovered by the individual SNP approach with the corresponding haplotyp...

Number of variants and genotyping rates for SNP datasets generated in this study.

John Soghigian (3418565)
Theodore G. Andreadis (257136)
Goudarz Molaei (790980)

August 2018

Number of variants and genotyping rates for SNP datasets generated in this study.</p

Top GWAS SNP hits in genes of functional interest for T2D, organized by chromosome.

Denise Anderson (125432)
Heather J. Cordell (173189)
Michaela Fakiola (73496)
Richard W. Francis (155442)
Genevieve Syn (700992)
Elizabeth S. H. Scaman (125424)
Elizabeth Davis (304899)
Simon J. Miles (700993)
Toby McLeay (700994)
Sarra E. Jamieson (125443)
Jenefer M. Blackwell (125437)

March 2015

Data analyzed in GenABEL using genotyped or 1000G imputed data for all individuals with doctor-di...

Annotation of homozygous SNPs between TC-reg-2008 and WT.

Di Zhang (197959)
Zhenhui Wang (560943)
Ningning Wang (560944)
Yang Gao (18005)
Ying Liu (18461)
Ying Wu (19057)
Yan Bai (28807)
Zhibin Zhang (102722)
Xiuyun Lin (136096)
Yuzhu Dong (210115)
Xiufang Ou (136093)
Chunming Xu (136095)
Bao Liu (136109)

May 2014

(A) Number and percentile of homozygous SNPs between TC-reg-2008 and WT were located in genic and...

Candidate genes and SNPs, VNTR and indel loci identified and selected for this study.

Elvis Ofon (4059550)
Harry Noyes (121595)
Vincent Ebo’o Eyanga (6504323)
Flobert Njiokou (208646)
Mathurin Koffi (301501)
Pythagore Fogue (4540180)
Christiane Hertz-Fowler (243178)
Annette MacLeod (12779)
Enock Matovu (150725)
Gustave Simo (428002)

April 2019

Candidate genes and SNPs, VNTR and indel loci identified and selected for this study.</p

The list of detected genes with direct or inverted repeats of 17 or more nucleotides in length.

Michal Strouhal (48850)
Lenka Mikalová (133591)
Jan Haviernik (5843138)
Sascha Knauf (111363)
Sylvia Bruisten (438918)
Gerda T. Noordhoek (5843141)
Jan Oppelt (3815176)
Darina Čejková (133588)
David Šmajs (48851)

October 2018

The list of detected genes with direct or inverted repeats of 17 or more nucleotides in length.</p

SNP sequences and GENALEX file

Hanne De Kort (3248907)
Katrien Vandepitte (424035)
Joachim Mergeay (196885)
Kristine Vander Mijnsbrugge (3291585)
Olivier Honnay (387662)

November 2016

Sequences of the 250 SNPs (together with their functional annotations) are available in tab 1 of the...

23andMe SNPs for which SNPedia annotations are available

Gustavo Glusman (5925)
Mike Cariaso (98498)
Rafael Jimenez (98499)
Daniel Swan (98500)
Bastian Greshake (98496)
Jong Bhak (64076)
Darren W Logan (98497)
Manuel Corpas (97270)

July 2012

Each file contains all SNPs in the individual matching an annotated SNP in SNPedia. SNPedia annot...

Detailed information for the 16 significant candidate genes that were also inferred genes.

Lei Chen (54296)
Chen Chu (687913)
Xiangyin Kong (48989)
Tao Huang (110613)
Yu-Dong Cai (133116)

January 2015

Detailed information for the 16 significant candidate genes that were also inferred genes.</p

Genes within the two 500 kb bins that reached “suggestive” significance in the ROH mapping analysis.

Matthew C. Keller (171356)
Matthew A. Simonson (171361)
Stephan Ripke (156076)
Ben M. Neale (171367)
Pablo V. Gejman (171372)
Daniel P. Howrigan (171378)
Sang Hong Lee (77173)
Todd Lencz (52220)
Douglas F. Levinson (171384)
Patrick F. Sullivan (143608)
The Schizophrenia Psychiatric Genome-Wide Association Study Consortium (171388)

April 2012

Genes within the two 500 kb bins that reached “suggestive” significance in the ROH mapping analys...

List of candidate genes annotated in an interval of 500Kb (250 Kb up- and downstream) for the individual SNPs with genotypic TRD effect.

Abstract

Extracted data

List of candidate genes annotated in an interval of 500Kb (250 Kb up- and downstream) for the individual SNPs with genotypic TRD effect.

Abstract

Extracted data

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