PPI networks of differentially expressed genes in GSE76092 dataset by IMEx database and visualized in cytoscape.

The overlapping hub genes in the PPI networks of down-regulated differentially expressed genes (DEGs) from GSE76092 and GSE42387.

Tayebeh Cheraghi-shavi (16747816)
Razieh Jalal (16747819)
Zarrin Minuchehr (482407)

August 2023

The overlapping hub genes in the PPI networks of down-regulated differentially expressed genes (DEGs...

The protein-protein interaction (PPI) networks of up- and down-regulated DEGs which co-expressed in all three gene profiles.

Gaoyang Chen (5693069)
Qingyu Wang (697246)
Qiwei Yang (70776)
Zhaoyan Li (5693072)
Zhenwu Du (836714)
Ming Ren (43296)
Haiyue Zhao (5693075)
Yang Song (88132)
Guizhen Zhang (679550)

August 2018

(A) The PPI network of 1 up-regulated DEG (CADM1) and proteins related to CADM1. (B) The PPI network...

Protein-protein interaction network analysis for the top 2000 genes which showed a higher expression level in RG.

Wei-Wei Wang (1626301)
Chao Zheng (728465)
Wan-Jun Hao (408177)
Chun-Lei Ma (544233)
Jian-Qiang Ma (544231)
De-Jiang Ni (3439100)
Liang Chen (73736)

August 2018

This interaction network for the top 2000 genes which showed a higher expression level in RG was ...

PPI networks of differentially expressed genes in GSE76092 dataset by IMEx database and visualized in cytoscape.

Tayebeh Cheraghi-shavi (16747816)
Razieh Jalal (16747819)
Zarrin Minuchehr (482407)

August 2023

The nodes represent genes and edges represent interaction between genes. The red and blue nodes sign...

PPI networks of differentially expressed genes in GSE42387 dataset by IMEx database and visualized in cytoscape.

Tayebeh Cheraghi-shavi (16747816)
Razieh Jalal (16747819)
Zarrin Minuchehr (482407)

August 2023

The nodes represent genes and edges represent interaction between genes. The red and blue nodes sign...

PPI networks of common differentially expressed genes in GSE42387 and GSE76092 datasets by IMEx database and visualized in cytoscape.

Tayebeh Cheraghi-shavi (16747816)
Razieh Jalal (16747819)
Zarrin Minuchehr (482407)

August 2023

The nodes represent genes and edges represent interaction between genes. The red and blue nodes sign...

PPI networks of common hub genes in GSE42387 and GSE76092 datasets constructed using the cytoHubba plug-in in Cytoscape based on IMEx database.

Tayebeh Cheraghi-shavi (16747816)
Razieh Jalal (16747819)
Zarrin Minuchehr (482407)

August 2023

(A) Up-regulated and (B) down-regulated common DEGs. The nodes and edges represent genes and their i...

Protein–protein interaction (PPI) network of differentially expressed genes(A) up-regulated genes and (B) down-regulated genes.

Precious Takondwa Makondi (4281085)
Chia-Hwa Lee (2965035)
Chien-Yu Huang (802982)
Chi-Ming Chu (306302)
Yu-Jia Chang (143398)
Po-Li Wei (292225)

January 2018

The PPI pairs were imported into Cytoscape software as described in methods and materials. Pink n...

Protein-protein interaction (PPI) network constructed by the differentially expressed genes (DEGs).

Chunhua Cao (832579)
Jianhua Chen (398446)
Chengqi Lyu (832580)
Jia Yu (220212)
Wei Zhao (14321)
Yi Wang (32470)
Derong Zou (832581)

December 2015

Node size represents node degree; a larger size indicates a larger degree. Red represents up-regu...

PPPI networks generated from the induced genes (A) and the repressed genes (B).

Lulu Shen (611943)
Ye Li (290115)
Linghuo Jiang (412643)
Xiaoyuan Wang (492534)

August 2014

Green nodes indicate proteins encoded by the induced genes, while red nodes represent proteins en...

Visualization of Differentially Expressed Genes (DEGs) on MAP gene interaction network.

Jenn-Wei Chen (160355)
Joy Scaria (74080)
Yung-Fu Chang (135734)

June 2012

Interaction information of MAP genes was retrieved from STRING database. Interactions with confid...

The interaction networks for DEGs as predicted by GeneMania and visualized in Cytoscape.

Adeel Malik (23840)
Eun Ju Lee (414663)
Arif Tasleem Jan (692645)
Sarafraz Ahmad (539680)
Kyung-Hyun Cho (774040)
Jihoe Kim (539683)
Inho Choi (158094)

July 2015

The three networks represent interactions for A) down-regulated genes, B) up-regulated genes, and...

PPI Network of DE-FRGs and hub gene detection.

Yan Huang (46805)
Jun Peng (192647)
Qiuhua Liang (3097227)

January 2023

(A) PPI network of 52 DE-FRGs. Green represents downregulated genes, and red represents upregulated ...

Protein-protein interaction networks of the major DEGs.

Wen Huang (186929)
Hongmei Li (51944)
Chuhang Cheng (6053732)
Chunhua Ren (776468)
Ting Chen (15205)
Xiao Jiang (487846)
Kaimin Cheng (6053735)
Peng Luo (488595)
Chaoqun Hu (776472)

December 2018

(A) Volcano-plot figures of the DEGs in the comparison groups of T_1/CT (the left side), PPI network...

The overlapping hub genes in the PPI networks of up-regulated differentially expressed genes (DEGs) from GSE76092 and GSE42387.

Tayebeh Cheraghi-shavi (16747816)
Razieh Jalal (16747819)
Zarrin Minuchehr (482407)

August 2023

The overlapping hub genes in the PPI networks of up-regulated differentially expressed genes (DEGs) ...

The overlapping hub genes in the PPI networks of down-regulated differentially expressed genes (DEGs) from GSE76092 and GSE42387.

Tayebeh Cheraghi-shavi (16747816)
Razieh Jalal (16747819)
Zarrin Minuchehr (482407)

August 2023

The overlapping hub genes in the PPI networks of down-regulated differentially expressed genes (DEGs...

The protein-protein interaction (PPI) networks of up- and down-regulated DEGs which co-expressed in all three gene profiles.

Gaoyang Chen (5693069)
Qingyu Wang (697246)
Qiwei Yang (70776)
Zhaoyan Li (5693072)
Zhenwu Du (836714)
Ming Ren (43296)
Haiyue Zhao (5693075)
Yang Song (88132)
Guizhen Zhang (679550)

August 2018

(A) The PPI network of 1 up-regulated DEG (CADM1) and proteins related to CADM1. (B) The PPI network...

Protein-protein interaction network analysis for the top 2000 genes which showed a higher expression level in RG.

Wei-Wei Wang (1626301)
Chao Zheng (728465)
Wan-Jun Hao (408177)
Chun-Lei Ma (544233)
Jian-Qiang Ma (544231)
De-Jiang Ni (3439100)
Liang Chen (73736)

August 2018

This interaction network for the top 2000 genes which showed a higher expression level in RG was ...

PPI networks of differentially expressed genes in GSE76092 dataset by IMEx database and visualized in cytoscape.

Tayebeh Cheraghi-shavi (16747816)
Razieh Jalal (16747819)
Zarrin Minuchehr (482407)

August 2023

The nodes represent genes and edges represent interaction between genes. The red and blue nodes sign...

PPI networks of differentially expressed genes in GSE42387 dataset by IMEx database and visualized in cytoscape.

Tayebeh Cheraghi-shavi (16747816)
Razieh Jalal (16747819)
Zarrin Minuchehr (482407)

August 2023

The nodes represent genes and edges represent interaction between genes. The red and blue nodes sign...

PPI networks of common differentially expressed genes in GSE42387 and GSE76092 datasets by IMEx database and visualized in cytoscape.

Tayebeh Cheraghi-shavi (16747816)
Razieh Jalal (16747819)
Zarrin Minuchehr (482407)

August 2023

The nodes represent genes and edges represent interaction between genes. The red and blue nodes sign...

PPI networks of common hub genes in GSE42387 and GSE76092 datasets constructed using the cytoHubba plug-in in Cytoscape based on IMEx database.

Tayebeh Cheraghi-shavi (16747816)
Razieh Jalal (16747819)
Zarrin Minuchehr (482407)

August 2023

(A) Up-regulated and (B) down-regulated common DEGs. The nodes and edges represent genes and their i...

Protein–protein interaction (PPI) network of differentially expressed genes(A) up-regulated genes and (B) down-regulated genes.

Precious Takondwa Makondi (4281085)
Chia-Hwa Lee (2965035)
Chien-Yu Huang (802982)
Chi-Ming Chu (306302)
Yu-Jia Chang (143398)
Po-Li Wei (292225)

January 2018

The PPI pairs were imported into Cytoscape software as described in methods and materials. Pink n...

Protein-protein interaction (PPI) network constructed by the differentially expressed genes (DEGs).

Chunhua Cao (832579)
Jianhua Chen (398446)
Chengqi Lyu (832580)
Jia Yu (220212)
Wei Zhao (14321)
Yi Wang (32470)
Derong Zou (832581)

December 2015

Node size represents node degree; a larger size indicates a larger degree. Red represents up-regu...

PPPI networks generated from the induced genes (A) and the repressed genes (B).

Lulu Shen (611943)
Ye Li (290115)
Linghuo Jiang (412643)
Xiaoyuan Wang (492534)

August 2014

Green nodes indicate proteins encoded by the induced genes, while red nodes represent proteins en...

Visualization of Differentially Expressed Genes (DEGs) on MAP gene interaction network.

Jenn-Wei Chen (160355)
Joy Scaria (74080)
Yung-Fu Chang (135734)

June 2012

Interaction information of MAP genes was retrieved from STRING database. Interactions with confid...

The interaction networks for DEGs as predicted by GeneMania and visualized in Cytoscape.

Adeel Malik (23840)
Eun Ju Lee (414663)
Arif Tasleem Jan (692645)
Sarafraz Ahmad (539680)
Kyung-Hyun Cho (774040)
Jihoe Kim (539683)
Inho Choi (158094)

July 2015

The three networks represent interactions for A) down-regulated genes, B) up-regulated genes, and...

PPI Network of DE-FRGs and hub gene detection.

Yan Huang (46805)
Jun Peng (192647)
Qiuhua Liang (3097227)

January 2023

(A) PPI network of 52 DE-FRGs. Green represents downregulated genes, and red represents upregulated ...

Protein-protein interaction networks of the major DEGs.

Wen Huang (186929)
Hongmei Li (51944)
Chuhang Cheng (6053732)
Chunhua Ren (776468)
Ting Chen (15205)
Xiao Jiang (487846)
Kaimin Cheng (6053735)
Peng Luo (488595)
Chaoqun Hu (776472)

December 2018

(A) Volcano-plot figures of the DEGs in the comparison groups of T_1/CT (the left side), PPI network...

The overlapping hub genes in the PPI networks of up-regulated differentially expressed genes (DEGs) from GSE76092 and GSE42387.

Tayebeh Cheraghi-shavi (16747816)
Razieh Jalal (16747819)
Zarrin Minuchehr (482407)

August 2023

The overlapping hub genes in the PPI networks of up-regulated differentially expressed genes (DEGs) ...

The overlapping hub genes in the PPI networks of down-regulated differentially expressed genes (DEGs) from GSE76092 and GSE42387.

Tayebeh Cheraghi-shavi (16747816)
Razieh Jalal (16747819)
Zarrin Minuchehr (482407)

August 2023

The overlapping hub genes in the PPI networks of down-regulated differentially expressed genes (DEGs...

The protein-protein interaction (PPI) networks of up- and down-regulated DEGs which co-expressed in all three gene profiles.

Gaoyang Chen (5693069)
Qingyu Wang (697246)
Qiwei Yang (70776)
Zhaoyan Li (5693072)
Zhenwu Du (836714)
Ming Ren (43296)
Haiyue Zhao (5693075)
Yang Song (88132)
Guizhen Zhang (679550)

August 2018

(A) The PPI network of 1 up-regulated DEG (CADM1) and proteins related to CADM1. (B) The PPI network...

Protein-protein interaction network analysis for the top 2000 genes which showed a higher expression level in RG.

Wei-Wei Wang (1626301)
Chao Zheng (728465)
Wan-Jun Hao (408177)
Chun-Lei Ma (544233)
Jian-Qiang Ma (544231)
De-Jiang Ni (3439100)
Liang Chen (73736)

August 2018

This interaction network for the top 2000 genes which showed a higher expression level in RG was ...

PPI networks of differentially expressed genes in GSE76092 dataset by IMEx database and visualized in cytoscape.

Abstract

Extracted data

PPI networks of differentially expressed genes in GSE76092 dataset by IMEx database and visualized in cytoscape.

Abstract

Extracted data

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