Monaco et al. generate an RNA-seq dataset on 29 immune cell types and identify modules of cell type-specific, co-expressed, and housekeeping genes. The mRNA heterogeneity and abundance of the different cell types were examined. Absolute deconvolution of PBMCs was obtained by taking into account mRNA abundance when normalizing the signature matrix
Abstract Single cell RNA sequencing has a central role in immune profiling, identifying specific imm...
10x Genomics is a highly accessible single cell RNA sequencing platform that allows for simultaneous...
Abstract Objective Transcriptional profiling of immune cells is an indispensable tool in biomedical ...
Summary: The molecular characterization of immune subsets is important for designing effective strat...
The molecular characterization of immune subsets is important for designing effective strategies to ...
Cell-type specific gene expression profiles are needed for many computational methods operating on b...
International audienceMotivationThe composition and density of immune cells in the tumor microenviro...
<div><p>Sequence variation can affect the physiological state of the immune system. Major experiment...
Multiple approaches have been developed to infer abundance of different cell types in heterogeneous ...
This archive contains input data, singularity containers as well as all results related to the singl...
BACKGROUND: Expression quantitative trait loci (eQTL) studies are used to interpret the function of ...
Understanding how populations of human T cells leverage cellular heterogeneity, plasticity, and dive...
Many computational methods to infer proportions of individual cell types from bulk transcriptomics d...
<p>(<b>A</b>) A simple reference data. Shown are three cell types (<i>c1-c3</i>, left to right); eac...
Abstract Deconvolution of RNA sequencing data is a computational method used to estimate the relativ...
Abstract Single cell RNA sequencing has a central role in immune profiling, identifying specific imm...
10x Genomics is a highly accessible single cell RNA sequencing platform that allows for simultaneous...
Abstract Objective Transcriptional profiling of immune cells is an indispensable tool in biomedical ...
Summary: The molecular characterization of immune subsets is important for designing effective strat...
The molecular characterization of immune subsets is important for designing effective strategies to ...
Cell-type specific gene expression profiles are needed for many computational methods operating on b...
International audienceMotivationThe composition and density of immune cells in the tumor microenviro...
<div><p>Sequence variation can affect the physiological state of the immune system. Major experiment...
Multiple approaches have been developed to infer abundance of different cell types in heterogeneous ...
This archive contains input data, singularity containers as well as all results related to the singl...
BACKGROUND: Expression quantitative trait loci (eQTL) studies are used to interpret the function of ...
Understanding how populations of human T cells leverage cellular heterogeneity, plasticity, and dive...
Many computational methods to infer proportions of individual cell types from bulk transcriptomics d...
<p>(<b>A</b>) A simple reference data. Shown are three cell types (<i>c1-c3</i>, left to right); eac...
Abstract Deconvolution of RNA sequencing data is a computational method used to estimate the relativ...
Abstract Single cell RNA sequencing has a central role in immune profiling, identifying specific imm...
10x Genomics is a highly accessible single cell RNA sequencing platform that allows for simultaneous...
Abstract Objective Transcriptional profiling of immune cells is an indispensable tool in biomedical ...