Multiple templates can often be used to build more accurate homology models than models built from a single template. Here we introduce PconsM, an automated protocol that uses multiple templates to build protein models. PconsM has been among the top-performing methods in the recent CASP experiments and consistently perform better than the single template models used in Pcons. net. In particular for the easier targets with many alternative templates with a high degree of sequence identity, quality is readily improved with a few percentages over the highest ranked model built on a single template. PconsM is available as an additional pipeline within the Pcons. net protein structure prediction server.authorCount :4</p
AbstractMost protein structure prediction methods use templates to assist in the construction of pro...
Background: Protein structures are critical for understanding the mechanisms of biological systems a...
SummaryThe total number of protein-protein complex structures currently available in the Protein Dat...
Multiple templates can often be used to build more accurate homology models than models built from a...
Motivation: Protein structure prediction is one of the most important problems in structural bioinfo...
The most successful methods for predicting the structure of a protein from its sequence rely on iden...
Homology modeling predicts the 3D structure of a query protein based on the sequence alignment with ...
Homology modeling predicts the 3D structure of a query protein based on the sequence alignment with ...
<p>(A) Our two-component mixture restraints improve GDT-ha model quality over Modeller’s default res...
Abstract Background Template selection and target-template alignment are critical steps for template...
Protein structure prediction provides valuable insights into function, and comparative modeling is o...
Proteins play a crucial roll in all biological processes. The wide range of protein functions is mad...
MOTIVATION: Two major bottlenecks in advancing comparative protein structure modeling are the effici...
CASP (Critical Assessment of protein Structure Prediction) is a community-wide experiment for protei...
Template-based modeling (termed also Comparative or Homology Modeling) of a protein structure is one...
AbstractMost protein structure prediction methods use templates to assist in the construction of pro...
Background: Protein structures are critical for understanding the mechanisms of biological systems a...
SummaryThe total number of protein-protein complex structures currently available in the Protein Dat...
Multiple templates can often be used to build more accurate homology models than models built from a...
Motivation: Protein structure prediction is one of the most important problems in structural bioinfo...
The most successful methods for predicting the structure of a protein from its sequence rely on iden...
Homology modeling predicts the 3D structure of a query protein based on the sequence alignment with ...
Homology modeling predicts the 3D structure of a query protein based on the sequence alignment with ...
<p>(A) Our two-component mixture restraints improve GDT-ha model quality over Modeller’s default res...
Abstract Background Template selection and target-template alignment are critical steps for template...
Protein structure prediction provides valuable insights into function, and comparative modeling is o...
Proteins play a crucial roll in all biological processes. The wide range of protein functions is mad...
MOTIVATION: Two major bottlenecks in advancing comparative protein structure modeling are the effici...
CASP (Critical Assessment of protein Structure Prediction) is a community-wide experiment for protei...
Template-based modeling (termed also Comparative or Homology Modeling) of a protein structure is one...
AbstractMost protein structure prediction methods use templates to assist in the construction of pro...
Background: Protein structures are critical for understanding the mechanisms of biological systems a...
SummaryThe total number of protein-protein complex structures currently available in the Protein Dat...