The mean ranked expression per cancer type of the 67 immune related genes that the celltype scores are calculated from, for both the cancer cell line data from the CCLE project, and from the tumour samples in TCGA. Low rank = low expression. (PDF)</p
<p>Non-tumor TF means not listed in <i>CancerGenes</i>. (A) In gene set selected by statistical thre...
<p>T represents tumor samples and N for normal ones, and “+” stands for high expression (above-avera...
<p>Ranking of the stability of the expression of candidate reference genes by NormFinder, geNorm, an...
<p>The rank lists were integrated by <i>Q</i> statistic. Rank 1 and rank 2 were the integrated rank ...
<p>The Heatmap of expression levels based on the top ten frequently selected genes on the six data (...
Correlations in gene expression (log2 [adjCPM-UQ + 1]) by cancer type/subtype or in normal tissue fo...
Comparison of gene expression of TCGA ovarian cancer sub-types by patient samples (top) and cell clu...
<p>A) Cell surface and B) apoptosis-related whole gene expression estimates from 221 lung squamous c...
<p>Expression values of candidate genes (genes to prioritize) in immune and non immune tissues.</p
The heatmap shows hierarchical clustering of 770 immune-related genes in all 515 patients across the...
Gene expression mean and variance ranks, across-study and tissue-specific. (XLSX)</p
<p>(A) SLC6A8: rank 500. (B) HLF: rank 1000. (C) ATP5F1: rank 2000. (D) ...
<p>Expression of KCNK genes (KCNK1–18) in 20 cancers compared to normal tissue controls. Shown is th...
(A) The density plots represent the sample distribution of observed z-scores of 10 genes. (B) The de...
Survivin (A), CK20 (B), E-cadherin (C) and CD44 (D) gene expression levels in G1, G2 and G3 BCs. G1:...
<p>Non-tumor TF means not listed in <i>CancerGenes</i>. (A) In gene set selected by statistical thre...
<p>T represents tumor samples and N for normal ones, and “+” stands for high expression (above-avera...
<p>Ranking of the stability of the expression of candidate reference genes by NormFinder, geNorm, an...
<p>The rank lists were integrated by <i>Q</i> statistic. Rank 1 and rank 2 were the integrated rank ...
<p>The Heatmap of expression levels based on the top ten frequently selected genes on the six data (...
Correlations in gene expression (log2 [adjCPM-UQ + 1]) by cancer type/subtype or in normal tissue fo...
Comparison of gene expression of TCGA ovarian cancer sub-types by patient samples (top) and cell clu...
<p>A) Cell surface and B) apoptosis-related whole gene expression estimates from 221 lung squamous c...
<p>Expression values of candidate genes (genes to prioritize) in immune and non immune tissues.</p
The heatmap shows hierarchical clustering of 770 immune-related genes in all 515 patients across the...
Gene expression mean and variance ranks, across-study and tissue-specific. (XLSX)</p
<p>(A) SLC6A8: rank 500. (B) HLF: rank 1000. (C) ATP5F1: rank 2000. (D) ...
<p>Expression of KCNK genes (KCNK1–18) in 20 cancers compared to normal tissue controls. Shown is th...
(A) The density plots represent the sample distribution of observed z-scores of 10 genes. (B) The de...
Survivin (A), CK20 (B), E-cadherin (C) and CD44 (D) gene expression levels in G1, G2 and G3 BCs. G1:...
<p>Non-tumor TF means not listed in <i>CancerGenes</i>. (A) In gene set selected by statistical thre...
<p>T represents tumor samples and N for normal ones, and “+” stands for high expression (above-avera...
<p>Ranking of the stability of the expression of candidate reference genes by NormFinder, geNorm, an...