Tup1 and Isw2 Regulate Nucleosome Positions at HXT Family Genes.

(A) Integrated Genome Browser (IGB) tracks of MNase-Seq in wild type, Δisw2, and Δtup1 in stationary phase. Dashed gray lines indicate wild type nucleosome positions. (B) Volcano plot of Δisw2 deletion in stationary phase demonstrating shifted nucleosomes at the HXT1 locus. (C) MNase-Seq dyad signal across 217 genes with shifted nucleosomes in Δisw2 during stationary phase. “-1” indicates the first nucleosome upstream of the TSS, while “+1” indicates the first nucleosome downstream of the TSS. (D) Gene ontology terms for genes with shifted nucleosome positions in Δisw2 yeast at stationary phase, with relative enrichment (e) and p- value (p) indicated for each term.