Results of the realignment of a PV ISH coronal slice to the Nissl volume.

This figure shows coronal slices of the mouse brain from AIBS experiments of Nissl and PV (experiment id #868). ISH images from the AIBS (A) are realigned to their corresponding slice in the Nissl volume (B) using the Krepl et al.’s algorithm [56]. The registration is performed on the raw images from the AIBS as they provide more landmarks and then applied to the filtered images (C). (TIF)