Two epidemic trajectories of an SEIR-type Safe Blues strand with mean infection period 10 days (left), and 5 days (right). The remaining strand parameters are common to both strands. The ‘Exposed’ curve does not appear to be consistent with the ‘Infected’ curve. This happens because the average duration of exposure is only 12 hours and because the ‘Exposed’ curve plots the number of exposed individuals at a fixed time on each day. Thus, the plotted exposure counts represent only that subset of exposures that overlap the daily time at which they are counted.</p
<p>Each curve represents the mean epidemic curve from 25 replicates of each experiment. (A) Increasi...
<p>(A) Observed curve is compared to predicted curve and corresponding 95% CI one week before. Horiz...
<p>Broken line: susceptible; solid line: infected. In the right panel, the black and gray broken lin...
Infection trends over 5 days for strands in batch 1.06, categorized by 3 maximal infection distance ...
Infection trajectories for all strands in batch 2.01, categorized into SEIR (top left), SIR (top rig...
Dates of onset are represented in the x-axis and number of cases on the y-axis. The top of the verti...
Our method is capable of fitting different disease dynamics in different regions including infection...
a) The number of currently infected individuals is plotted versus time for different values of the i...
a) The effect of the length of the incubation period (the period in which the infection is not detec...
<p>Also shown is the mean of 1000 realisations of the SEIR model (dashed black line) and an eigendec...
<p>The curve was built using only the cases having clinical signs, for which it is possible to estim...
<p>Curves correspond to the fraction of infected (i.e. the prevalence – blue) and fraction of susce...
<p>Epidemic curve of infections with the outbreak strain of STEC O157, by date of onset.</p
Epidemic curve of the Menorca trip outbreak of SARS-CoV-2, Catalonia, June and July of 2021 (n = 760...
<p>Odds of a case being caused internally (i.e. as a result of other cases in that area) vs. externa...
<p>Each curve represents the mean epidemic curve from 25 replicates of each experiment. (A) Increasi...
<p>(A) Observed curve is compared to predicted curve and corresponding 95% CI one week before. Horiz...
<p>Broken line: susceptible; solid line: infected. In the right panel, the black and gray broken lin...
Infection trends over 5 days for strands in batch 1.06, categorized by 3 maximal infection distance ...
Infection trajectories for all strands in batch 2.01, categorized into SEIR (top left), SIR (top rig...
Dates of onset are represented in the x-axis and number of cases on the y-axis. The top of the verti...
Our method is capable of fitting different disease dynamics in different regions including infection...
a) The number of currently infected individuals is plotted versus time for different values of the i...
a) The effect of the length of the incubation period (the period in which the infection is not detec...
<p>Also shown is the mean of 1000 realisations of the SEIR model (dashed black line) and an eigendec...
<p>The curve was built using only the cases having clinical signs, for which it is possible to estim...
<p>Curves correspond to the fraction of infected (i.e. the prevalence – blue) and fraction of susce...
<p>Epidemic curve of infections with the outbreak strain of STEC O157, by date of onset.</p
Epidemic curve of the Menorca trip outbreak of SARS-CoV-2, Catalonia, June and July of 2021 (n = 760...
<p>Odds of a case being caused internally (i.e. as a result of other cases in that area) vs. externa...
<p>Each curve represents the mean epidemic curve from 25 replicates of each experiment. (A) Increasi...
<p>(A) Observed curve is compared to predicted curve and corresponding 95% CI one week before. Horiz...
<p>Broken line: susceptible; solid line: infected. In the right panel, the black and gray broken lin...