greenelab/covid19-review: pathogenesis-v4

Author Correction: Microbiome disturbance and resilience dynamics of the upper respiratory tract during influenza A virus infection

Drishti Kaul
Raveen Rathnasinghe
Marcela Ferres
Gene S. Tan
Aldo Barrera
Brett E. Pickett
Barbara A. Methe
Suman R. Das
Isolda Budnik
Rebecca A. Halpin
David Wentworth
Mirco Schmolke
Ignacio Mena
Randy A. Albrecht
Indresh Singh
Karen E. Nelson
Adolfo García-Sastre
Chris L. Dupont
Rafael A. Medina

June 2020

An amendment to this paper has been published and can be accessed via a link at the top of the paper

Publisher Correction: Identification and characterization of the novel colonization factor CS30 based on whole genome sequencing in enterotoxigenic Escherichia coli (ETEC).

von Mentzer, Astrid
Tobias, Joshua
Wiklund, Gudrun
Nordqvist, Stefan
Aslett, Martin
Dougan, Gordon
Sjöling, Åsa
Svennerholm, Ann-Mari

April 2018

A correction to this article has been published and is linked from the HTML and PDF versions of this...

Erratum: Gene cluster conservation provides insight into cercosporin biosynthesis and extends production to the genus Colletotrichum

De Jonge, Ronnie
Ebert, Malaika K.
Huitt-Roehl, Callie R.
Pal, Paramita
Suttle, Jeffrey C.
Spanner, Rebecca E.
Neubauer, Jonathan D.
Jurick, Wayne M.
Stott, Karina A.
Secor, Gary A.
Thomma, Bart P.H.J.
Van De Peer, Yves
Townsend, Craig A.
Bolton, Melvin D.

January 2018

The authors note that author Yves Van de Peer was incorrectly listed at affiliation aPlant-Microbe I...

greenelab/covid19-review: vaccines-novel-v2

HM Rando
Anthony Gitter
Ronan Lordan
Casey Greene
Daniel Himmelstein
Alexandra Lee
John J. Dziak
soumitagh
bansalvi
yemarshall
Christian Brueffer
nilswellhausen
aadattoli
Vincent Rubinetti
Marouen
Lucy D'Agostino McGowan
Sergey Knyazev
Adam MacLean
David Manheim
Elizabeth (Ellie) Sell
likhithakolla
byrdjb
Ariel Mundo
Michael Robson
yoson park
dianerafi
jessegmeyerlab
Fengling Hu
jinhui2
Simina M. Boca

October 2022

Novel vaccines manuscript v2. Second journal submission. This release is for the source files

Bacteria for Environmental

Mei-lin Chan
Gerardo Jaramillo
Krassimira R. Hristova
David A. Horsley
Mei-lin Chan
Gerardo Jaramillo
Krassimira R. Hristova
David A. Horsley

January 2011

Used with permission. NOTICE: this is the author’s version of a work that was accepted for publicati...

Corrigendum to “Rapid review protocol: Zinc for the prevention or treatment of COVID-19 and other coronavirus-related respiratory tract infections” [Integr Med Res 9 (2020): 100457]

Hunter, J.
Arentz, S.
Goldenberg, J.
Yang, G.
Beardsley, J.
Mertz, D.
Leeder, S.

January 2021

The authors regret that one of the authors' affiliation was incorrectly printed in the above article...

greenelab/covid19-review: vaccines-novel-v1-output

HM Rando
Anthony Gitter
Ronan Lordan
Casey Greene
Daniel Himmelstein
Alexandra Lee
John J. Dziak
soumitagh
bansalvi
yemarshall
Christian Brueffer
nilswellhausen
aadattoli
Vincent Rubinetti
Marouen
Lucy D'Agostino McGowan
Sergey Knyazev
Adam MacLean
David Manheim
Elizabeth (Ellie) Sell
likhithakolla
byrdjb
Ariel Mundo
Michael Robson
yoson park
dianerafi
jessegmeyerlab
Fengling Hu
jinhui2
Simina M. Boca

September 2022

Novel vaccines manuscript v1. First journal submission. This release is for the output files

The life cycle of non-polio enteroviruses and how to target it (vol 16, pg 368, 2018)

Baggen, Jim
Thibaut, Hendrik Jan
Strating, Jeroen RPM
van Kuppeveld, Frank JM

June 2018

In the version of this Review originally published, co-author Hendrik Jan Thibaut's name was incorre...

Author Correction: COVID-19 Disease Map, building a computational repository of SARS-CoV-2 virus-host interaction mechanisms

Ostaszewski, Marek
Mazein, Alexander
Gillespie, Marc E
Kuperstein, Inna
Niarakis, Anna
Hermjakob, Henning
Pico, Alexander R
Willighagen, Egon L
Evelo, Chris T
Hasenauer, Jan
Schreiber, Falk
Dräger, Andreas
Demir, Emek
Wolkenhauer, Olaf
Furlong, Laura I
Barillot, Emmanuel
Dopazo, Joaquin
Orta-Resendiz, Aurelio
Messina, Francesco
Valencia, Alfonso
Funahashi, Akira
Kitano, Hiroaki
Auffray, Charles
Balling, Rudi
Schneider, Reinhard

July 2020

An amendment to this paper has been published and can be accessed via a link at the top of the paper...

Arginase I, polyamine, and prostaglandin E2 pathways suppress the inflammatory response and contribute to diffuse cutaneous leishmaniasis (vol 211, pg 426, 2015)

Franca-Costa
Van Weyenbergh, Johan

January 2016

In “Arginase I, polyamine, and prostaglandin E2 pathways suppress the inflammatory response and cont...

Author Correction: Inter-species metabolic interactions in an in-vitro minimal human gut microbiome of core bacteria

Shetty, Sudarshan A.
Kuipers, Ben
Atashgahi, Siavash
Aalvink, Steven
Smidt, Hauke
de Vos, Willem M.

January 2022

In the Methods of the original Article, strain accession number DSM 1736 was displayed instead of DS...

Data from Mehra et al. (2020-05-29), "Hydroxychloroquine or chloroquine with or without a macrolide for treatment of COVID-19: a multinational registry analysis"

Mehra, Mandeep R.
Desai, Sapan S.
Ruschitzka, Frank
Patel, Amit N.

June 2020

Recent reports have identified errors and implausible results in the title paper, few of which have ...

Correction to: Neisseria lactamica Y92–1009 complete genome sequence

Anish K. Pandey
David W. Cleary
Jay R. Laver
Martin C. J. Maiden
Xavier Didelot
Andrew Gorringe
Robert C. Read

February 2018

Correction After publication of the original article [1] it was identified that an incorrect version...

A differential effect of E. coli toxin–antitoxin systems on cell death in liquid media and biofilm formation. PLoS ONE 4: e6785

Ilana Kolodkin-gal
Reut Verdiger
Ayalla Shlosberg-fedida
Hanna Engelberg-kulka
Biofilm Formation

January 2009

There are errors in the lower panels of Fig 4A and Fig 4D of the published article. Please see the c...

Correction to: Complete genome of a novel virulent phage ST0 lysing Escherichia coli H8

Honghui Liu
Xinchun Liu
Jinqing Li

July 2018

Table 1 of this original publication contained an error. The updated Table 1 is published in this co...

Author Correction: Microbiome disturbance and resilience dynamics of the upper respiratory tract during influenza A virus infection

Drishti Kaul
Raveen Rathnasinghe
Marcela Ferres
Gene S. Tan
Aldo Barrera
Brett E. Pickett
Barbara A. Methe
Suman R. Das
Isolda Budnik
Rebecca A. Halpin
David Wentworth
Mirco Schmolke
Ignacio Mena
Randy A. Albrecht
Indresh Singh
Karen E. Nelson
Adolfo García-Sastre
Chris L. Dupont
Rafael A. Medina

June 2020

An amendment to this paper has been published and can be accessed via a link at the top of the paper

Publisher Correction: Identification and characterization of the novel colonization factor CS30 based on whole genome sequencing in enterotoxigenic Escherichia coli (ETEC).

von Mentzer, Astrid
Tobias, Joshua
Wiklund, Gudrun
Nordqvist, Stefan
Aslett, Martin
Dougan, Gordon
Sjöling, Åsa
Svennerholm, Ann-Mari

April 2018

A correction to this article has been published and is linked from the HTML and PDF versions of this...

Erratum: Gene cluster conservation provides insight into cercosporin biosynthesis and extends production to the genus Colletotrichum

De Jonge, Ronnie
Ebert, Malaika K.
Huitt-Roehl, Callie R.
Pal, Paramita
Suttle, Jeffrey C.
Spanner, Rebecca E.
Neubauer, Jonathan D.
Jurick, Wayne M.
Stott, Karina A.
Secor, Gary A.
Thomma, Bart P.H.J.
Van De Peer, Yves
Townsend, Craig A.
Bolton, Melvin D.

January 2018

The authors note that author Yves Van de Peer was incorrectly listed at affiliation aPlant-Microbe I...

greenelab/covid19-review: vaccines-novel-v2

HM Rando
Anthony Gitter
Ronan Lordan
Casey Greene
Daniel Himmelstein
Alexandra Lee
John J. Dziak
soumitagh
bansalvi
yemarshall
Christian Brueffer
nilswellhausen
aadattoli
Vincent Rubinetti
Marouen
Lucy D'Agostino McGowan
Sergey Knyazev
Adam MacLean
David Manheim
Elizabeth (Ellie) Sell
likhithakolla
byrdjb
Ariel Mundo
Michael Robson
yoson park
dianerafi
jessegmeyerlab
Fengling Hu
jinhui2
Simina M. Boca

October 2022

Novel vaccines manuscript v2. Second journal submission. This release is for the source files

Bacteria for Environmental

Mei-lin Chan
Gerardo Jaramillo
Krassimira R. Hristova
David A. Horsley
Mei-lin Chan
Gerardo Jaramillo
Krassimira R. Hristova
David A. Horsley

January 2011

Used with permission. NOTICE: this is the author’s version of a work that was accepted for publicati...

Corrigendum to “Rapid review protocol: Zinc for the prevention or treatment of COVID-19 and other coronavirus-related respiratory tract infections” [Integr Med Res 9 (2020): 100457]

Hunter, J.
Arentz, S.
Goldenberg, J.
Yang, G.
Beardsley, J.
Mertz, D.
Leeder, S.

January 2021

The authors regret that one of the authors' affiliation was incorrectly printed in the above article...

greenelab/covid19-review: vaccines-novel-v1-output

HM Rando
Anthony Gitter
Ronan Lordan
Casey Greene
Daniel Himmelstein
Alexandra Lee
John J. Dziak
soumitagh
bansalvi
yemarshall
Christian Brueffer
nilswellhausen
aadattoli
Vincent Rubinetti
Marouen
Lucy D'Agostino McGowan
Sergey Knyazev
Adam MacLean
David Manheim
Elizabeth (Ellie) Sell
likhithakolla
byrdjb
Ariel Mundo
Michael Robson
yoson park
dianerafi
jessegmeyerlab
Fengling Hu
jinhui2
Simina M. Boca

September 2022

Novel vaccines manuscript v1. First journal submission. This release is for the output files

The life cycle of non-polio enteroviruses and how to target it (vol 16, pg 368, 2018)

Baggen, Jim
Thibaut, Hendrik Jan
Strating, Jeroen RPM
van Kuppeveld, Frank JM

June 2018

In the version of this Review originally published, co-author Hendrik Jan Thibaut's name was incorre...

Author Correction: COVID-19 Disease Map, building a computational repository of SARS-CoV-2 virus-host interaction mechanisms

Ostaszewski, Marek
Mazein, Alexander
Gillespie, Marc E
Kuperstein, Inna
Niarakis, Anna
Hermjakob, Henning
Pico, Alexander R
Willighagen, Egon L
Evelo, Chris T
Hasenauer, Jan
Schreiber, Falk
Dräger, Andreas
Demir, Emek
Wolkenhauer, Olaf
Furlong, Laura I
Barillot, Emmanuel
Dopazo, Joaquin
Orta-Resendiz, Aurelio
Messina, Francesco
Valencia, Alfonso
Funahashi, Akira
Kitano, Hiroaki
Auffray, Charles
Balling, Rudi
Schneider, Reinhard

July 2020

An amendment to this paper has been published and can be accessed via a link at the top of the paper...

Arginase I, polyamine, and prostaglandin E2 pathways suppress the inflammatory response and contribute to diffuse cutaneous leishmaniasis (vol 211, pg 426, 2015)

Franca-Costa
Van Weyenbergh, Johan

January 2016

In “Arginase I, polyamine, and prostaglandin E2 pathways suppress the inflammatory response and cont...

Author Correction: Inter-species metabolic interactions in an in-vitro minimal human gut microbiome of core bacteria

Shetty, Sudarshan A.
Kuipers, Ben
Atashgahi, Siavash
Aalvink, Steven
Smidt, Hauke
de Vos, Willem M.

January 2022

In the Methods of the original Article, strain accession number DSM 1736 was displayed instead of DS...

Data from Mehra et al. (2020-05-29), "Hydroxychloroquine or chloroquine with or without a macrolide for treatment of COVID-19: a multinational registry analysis"

Mehra, Mandeep R.
Desai, Sapan S.
Ruschitzka, Frank
Patel, Amit N.

June 2020

Recent reports have identified errors and implausible results in the title paper, few of which have ...

Correction to: Neisseria lactamica Y92–1009 complete genome sequence

Anish K. Pandey
David W. Cleary
Jay R. Laver
Martin C. J. Maiden
Xavier Didelot
Andrew Gorringe
Robert C. Read

February 2018

Correction After publication of the original article [1] it was identified that an incorrect version...

A differential effect of E. coli toxin–antitoxin systems on cell death in liquid media and biofilm formation. PLoS ONE 4: e6785

Ilana Kolodkin-gal
Reut Verdiger
Ayalla Shlosberg-fedida
Hanna Engelberg-kulka
Biofilm Formation

January 2009

There are errors in the lower panels of Fig 4A and Fig 4D of the published article. Please see the c...

Correction to: Complete genome of a novel virulent phage ST0 lysing Escherichia coli H8

Honghui Liu
Xinchun Liu
Jinqing Li

July 2018

Table 1 of this original publication contained an error. The updated Table 1 is published in this co...

Author Correction: Microbiome disturbance and resilience dynamics of the upper respiratory tract during influenza A virus infection

Drishti Kaul
Raveen Rathnasinghe
Marcela Ferres
Gene S. Tan
Aldo Barrera
Brett E. Pickett
Barbara A. Methe
Suman R. Das
Isolda Budnik
Rebecca A. Halpin
David Wentworth
Mirco Schmolke
Ignacio Mena
Randy A. Albrecht
Indresh Singh
Karen E. Nelson
Adolfo García-Sastre
Chris L. Dupont
Rafael A. Medina

June 2020

An amendment to this paper has been published and can be accessed via a link at the top of the paper

Publisher Correction: Identification and characterization of the novel colonization factor CS30 based on whole genome sequencing in enterotoxigenic Escherichia coli (ETEC).

von Mentzer, Astrid
Tobias, Joshua
Wiklund, Gudrun
Nordqvist, Stefan
Aslett, Martin
Dougan, Gordon
Sjöling, Åsa
Svennerholm, Ann-Mari

April 2018

A correction to this article has been published and is linked from the HTML and PDF versions of this...

Erratum: Gene cluster conservation provides insight into cercosporin biosynthesis and extends production to the genus Colletotrichum

De Jonge, Ronnie
Ebert, Malaika K.
Huitt-Roehl, Callie R.
Pal, Paramita
Suttle, Jeffrey C.
Spanner, Rebecca E.
Neubauer, Jonathan D.
Jurick, Wayne M.
Stott, Karina A.
Secor, Gary A.
Thomma, Bart P.H.J.
Van De Peer, Yves
Townsend, Craig A.
Bolton, Melvin D.

January 2018

The authors note that author Yves Van de Peer was incorrectly listed at affiliation aPlant-Microbe I...

greenelab/covid19-review: pathogenesis-v4

Abstract

Extracted data

greenelab/covid19-review: pathogenesis-v4

Abstract

Extracted data

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