Phylogenetic trees constructed by avian orthoreovirus (ARV) based on nucleotide sequences of the L-class, M-class and σ-class homologous genome segments or genes.

Madarak orthoreovírusainak összehasonlító genomvizsgálata

Bayer-Dandár, Eszter

January 2016

Avian reoviruses belong to the genus Orthoreovirus. An increasing amount of data is becoming availab...

Phylogenetic analysis of the env gene nucleotide sequences from the ALV-J isolates and reference strains.

Xiangwei Zeng (551865)
Lanlan Liu (194137)
Ruijun Hao (551866)
Chunyan Han (551867)

April 2014

The tree was constructed on the basis of the minimum-evolution method using MEGA 4.0 software. Bo...

Phylogenetic trees showing the phylogenetic positions of the Miyazaki-Bali/2007 strain and other orthoreovirus strains based on deduced amino acid sequence of the sigma C protein (A), major inner capsid protein (B), sigma NS protein (C), and major outer capsid protein (D) listed in Table 1.

Atsushi Yamanaka (340147)
Akira Iwakiri (542649)
Tomoki Yoshikawa (367816)
Kouji Sakai (498530)
Harpal Singh (273486)
Daisuke Himeji (542650)
Ikuo Kikuchi (542651)
Akira Ueda (542652)
Seigo Yamamoto (542653)
Miho Miura (542654)
Yoko Shioyama (542655)
Kimiko Kawano (513348)
Tokiko Nagaishi (542656)
Minako Saito (542657)
Masumi Minomo (542658)
Naoyasu Iwamoto (542659)
Yoshio Hidaka (542660)
Hirotoshi Sohma (542661)
Takeshi Kobayashi (4712)
Yuta Kanai (114415)
Takehiro Kawagishi (542662)
Noriyo Nagata (389752)
Shuetsu Fukushi (542663)
Tetsuya Mizutani (58974)
Hideki Tani (357985)
Satoshi Taniguchi (542664)
Aiko Fukuma (354021)
Masayuki Shimojima (241787)
Ichiro Kurane (181627)
Tsutomu Kageyama (542665)
Takato Odagiri (247568)
Masayuki Saijo (324701)
Shigeru Morikawa (58979)

March 2014

Bootstrap values for each node are shown by the robustness of the tree. Miyazaki-Bali/2007, the s...

General genome features of a pheasant-origin avian orthoreovirus (ARV), the novel field variant of pheasant ARV (Reo/SDWF/Pheasant/17608/20).

Yi Tang (55726)
Haiyang Yu (543050)
Xiaoning Jiang (3559088)
Endong Bao (435080)
Dong Wang (73290)
Huaguang Lu (8107610)

November 2022

General genome features of a pheasant-origin avian orthoreovirus (ARV), the novel field variant of p...

Sequence identities between the pheasant ARV (Reo/SDWF/Pheasant/17608/20) and reference strains of Orthoreovirus genus members.

Yi Tang (55726)
Haiyang Yu (543050)
Xiaoning Jiang (3559088)
Endong Bao (435080)
Dong Wang (73290)
Huaguang Lu (8107610)

November 2022

Sequence identities between the pheasant ARV (Reo/SDWF/Pheasant/17608/20) and reference strains of O...

Phylogenetic trees of orthoreoviruses based on deduced amino acid sequence of the major inner capsid or sigma 1 (A) and outer capsid or sigma 2 (B) proteins.

Kaw Bing Chua (181623)
Kenny Voon (341896)
Gary Crameri (145854)
Hui Siu Tan (375824)
Juliana Rosli (375826)
Jennifer A. McEachern (368711)
Sivagami Suluraju (375828)
Meng Yu (145821)
Lin-Fa Wang (145863)

February 2013

GenBank accession number for each sequence is given in brackets next to the abbreviated virus nam...

Complete genome sequence of a novel avian orthoreovirus isolatedfrom gosling, China

Xiaoyu Niu...[et al.]

January 2018

AbstractAvian orthoreovirus (ARV) has been considered as a significant pathogen causing great infect...

Phylogenetic tree based on the complete genome (A) and hexon gene (B) sequences of avian adenoviruses belonging to genera Aviadenovirus.

Jing Zhao (21160)
Qi Zhong (769240)
Ye Zhao (39959)
Yan-xin Hu (723104)
Guo-zhong Zhang (723107)

July 2015

Strains HBQ12, BJH13 and JSJ13 were sequenced in this study, other avian adenovirus strains were ...

Phylogenetic trees of orthoreoviruses based on partial amino acid sequence of the cell attachment or sigma C protein (aa 1–324).

Kaw Bing Chua (181623)
Kenny Voon (341896)
Gary Crameri (145854)
Hui Siu Tan (375824)
Juliana Rosli (375826)
Jennifer A. McEachern (368711)
Sivagami Suluraju (375828)
Meng Yu (145821)
Lin-Fa Wang (145863)

February 2013

GenBank accession number for each sequence is given in brackets next to the abbreviated virus nam...

Phylogenetic tree for the genus avulvirus of the family Paramyxoviridae based on partial RNA-dependent RNA polymerase gene sequences.

Jemima Amery-Gale (5003480)
Carol A. Hartley (278915)
Paola K. Vaz (558792)
Marc S. Marenda (459640)
Jane Owens (1684813)
Paul A. Eden (5003483)
Joanne M. Devlin (278910)

March 2018

Maximum likelihood phylogenetic tree constructed using PhyML from a ClustalW2 alignment of the pa...

Phylogenetic relationships of REV coding regions.

Anna Maria Niewiadomska (375461)
Robert J. Gifford (237006)

August 2013

ML phylogenies constructed using (a) an alignment spanning residues 183–481 of the Pol polyprotei...

Molecular evolution of avian reovirus: evidence for genetic diversity and reassortment of the S-class genome segments and multiple cocirculating lineages

Liu, Hung J.
Lee, Long H.
Hsu, Hsiao W.
Kuo, Liam C.
Liao, Ming H.

September 2003

AbstractNucleotide sequences of the S-class genome segments of 17 field-isolates and vaccine strains...

Comparison of segment 5’ and 3’ non-coding regions of the pheasant ARV (Reo/SDWF/Pheasant/17608/20) with reference strains of Orthoreovirus genus members.

Yi Tang (55726)
Haiyang Yu (543050)
Xiaoning Jiang (3559088)
Endong Bao (435080)
Dong Wang (73290)
Huaguang Lu (8107610)

November 2022

Comparison of segment 5’ and 3’ non-coding regions of the pheasant ARV (Reo/SDWF/Pheasant/17608/20) ...

Phylogenetic trees - Avian H9 gene segment trees - 90% sequence identity

Seema Lakdawala (7816838)
Jennifer Jones (13283033)

September 2022

Phylogenetic trees corresponding to nucleotide sequences of gene segments in avian H9 viruses after ...

Phylogenetic trees - Avian H9 gene segment trees - 95% sequence identity

Seema Lakdawala (7816838)
Jennifer Jones (13283033)

September 2022

Phylogenetic trees corresponding to nucleotide sequences of gene segments in avian H9 viruses after ...

Madarak orthoreovírusainak összehasonlító genomvizsgálata

Bayer-Dandár, Eszter

January 2016

Avian reoviruses belong to the genus Orthoreovirus. An increasing amount of data is becoming availab...

Phylogenetic analysis of the env gene nucleotide sequences from the ALV-J isolates and reference strains.

Xiangwei Zeng (551865)
Lanlan Liu (194137)
Ruijun Hao (551866)
Chunyan Han (551867)

April 2014

The tree was constructed on the basis of the minimum-evolution method using MEGA 4.0 software. Bo...

Phylogenetic trees showing the phylogenetic positions of the Miyazaki-Bali/2007 strain and other orthoreovirus strains based on deduced amino acid sequence of the sigma C protein (A), major inner capsid protein (B), sigma NS protein (C), and major outer capsid protein (D) listed in Table 1.

Atsushi Yamanaka (340147)
Akira Iwakiri (542649)
Tomoki Yoshikawa (367816)
Kouji Sakai (498530)
Harpal Singh (273486)
Daisuke Himeji (542650)
Ikuo Kikuchi (542651)
Akira Ueda (542652)
Seigo Yamamoto (542653)
Miho Miura (542654)
Yoko Shioyama (542655)
Kimiko Kawano (513348)
Tokiko Nagaishi (542656)
Minako Saito (542657)
Masumi Minomo (542658)
Naoyasu Iwamoto (542659)
Yoshio Hidaka (542660)
Hirotoshi Sohma (542661)
Takeshi Kobayashi (4712)
Yuta Kanai (114415)
Takehiro Kawagishi (542662)
Noriyo Nagata (389752)
Shuetsu Fukushi (542663)
Tetsuya Mizutani (58974)
Hideki Tani (357985)
Satoshi Taniguchi (542664)
Aiko Fukuma (354021)
Masayuki Shimojima (241787)
Ichiro Kurane (181627)
Tsutomu Kageyama (542665)
Takato Odagiri (247568)
Masayuki Saijo (324701)
Shigeru Morikawa (58979)

March 2014

Bootstrap values for each node are shown by the robustness of the tree. Miyazaki-Bali/2007, the s...

General genome features of a pheasant-origin avian orthoreovirus (ARV), the novel field variant of pheasant ARV (Reo/SDWF/Pheasant/17608/20).

Yi Tang (55726)
Haiyang Yu (543050)
Xiaoning Jiang (3559088)
Endong Bao (435080)
Dong Wang (73290)
Huaguang Lu (8107610)

November 2022

General genome features of a pheasant-origin avian orthoreovirus (ARV), the novel field variant of p...

Sequence identities between the pheasant ARV (Reo/SDWF/Pheasant/17608/20) and reference strains of Orthoreovirus genus members.

Yi Tang (55726)
Haiyang Yu (543050)
Xiaoning Jiang (3559088)
Endong Bao (435080)
Dong Wang (73290)
Huaguang Lu (8107610)

November 2022

Sequence identities between the pheasant ARV (Reo/SDWF/Pheasant/17608/20) and reference strains of O...

Phylogenetic trees of orthoreoviruses based on deduced amino acid sequence of the major inner capsid or sigma 1 (A) and outer capsid or sigma 2 (B) proteins.

Kaw Bing Chua (181623)
Kenny Voon (341896)
Gary Crameri (145854)
Hui Siu Tan (375824)
Juliana Rosli (375826)
Jennifer A. McEachern (368711)
Sivagami Suluraju (375828)
Meng Yu (145821)
Lin-Fa Wang (145863)

February 2013

GenBank accession number for each sequence is given in brackets next to the abbreviated virus nam...

Complete genome sequence of a novel avian orthoreovirus isolatedfrom gosling, China

Xiaoyu Niu...[et al.]

January 2018

AbstractAvian orthoreovirus (ARV) has been considered as a significant pathogen causing great infect...

Phylogenetic tree based on the complete genome (A) and hexon gene (B) sequences of avian adenoviruses belonging to genera Aviadenovirus.

Jing Zhao (21160)
Qi Zhong (769240)
Ye Zhao (39959)
Yan-xin Hu (723104)
Guo-zhong Zhang (723107)

July 2015

Strains HBQ12, BJH13 and JSJ13 were sequenced in this study, other avian adenovirus strains were ...

Phylogenetic trees of orthoreoviruses based on partial amino acid sequence of the cell attachment or sigma C protein (aa 1–324).

Kaw Bing Chua (181623)
Kenny Voon (341896)
Gary Crameri (145854)
Hui Siu Tan (375824)
Juliana Rosli (375826)
Jennifer A. McEachern (368711)
Sivagami Suluraju (375828)
Meng Yu (145821)
Lin-Fa Wang (145863)

February 2013

GenBank accession number for each sequence is given in brackets next to the abbreviated virus nam...

Phylogenetic tree for the genus avulvirus of the family Paramyxoviridae based on partial RNA-dependent RNA polymerase gene sequences.

Jemima Amery-Gale (5003480)
Carol A. Hartley (278915)
Paola K. Vaz (558792)
Marc S. Marenda (459640)
Jane Owens (1684813)
Paul A. Eden (5003483)
Joanne M. Devlin (278910)

March 2018

Maximum likelihood phylogenetic tree constructed using PhyML from a ClustalW2 alignment of the pa...

Phylogenetic relationships of REV coding regions.

Anna Maria Niewiadomska (375461)
Robert J. Gifford (237006)

August 2013

ML phylogenies constructed using (a) an alignment spanning residues 183–481 of the Pol polyprotei...

Molecular evolution of avian reovirus: evidence for genetic diversity and reassortment of the S-class genome segments and multiple cocirculating lineages

Liu, Hung J.
Lee, Long H.
Hsu, Hsiao W.
Kuo, Liam C.
Liao, Ming H.

September 2003

AbstractNucleotide sequences of the S-class genome segments of 17 field-isolates and vaccine strains...

Comparison of segment 5’ and 3’ non-coding regions of the pheasant ARV (Reo/SDWF/Pheasant/17608/20) with reference strains of Orthoreovirus genus members.

Yi Tang (55726)
Haiyang Yu (543050)
Xiaoning Jiang (3559088)
Endong Bao (435080)
Dong Wang (73290)
Huaguang Lu (8107610)

November 2022

Comparison of segment 5’ and 3’ non-coding regions of the pheasant ARV (Reo/SDWF/Pheasant/17608/20) ...

Phylogenetic trees - Avian H9 gene segment trees - 90% sequence identity

Seema Lakdawala (7816838)
Jennifer Jones (13283033)

September 2022

Phylogenetic trees corresponding to nucleotide sequences of gene segments in avian H9 viruses after ...

Phylogenetic trees - Avian H9 gene segment trees - 95% sequence identity

Seema Lakdawala (7816838)
Jennifer Jones (13283033)

September 2022

Phylogenetic trees corresponding to nucleotide sequences of gene segments in avian H9 viruses after ...

Madarak orthoreovírusainak összehasonlító genomvizsgálata

Bayer-Dandár, Eszter

January 2016

Avian reoviruses belong to the genus Orthoreovirus. An increasing amount of data is becoming availab...

Phylogenetic analysis of the env gene nucleotide sequences from the ALV-J isolates and reference strains.

Xiangwei Zeng (551865)
Lanlan Liu (194137)
Ruijun Hao (551866)
Chunyan Han (551867)

April 2014

The tree was constructed on the basis of the minimum-evolution method using MEGA 4.0 software. Bo...

Phylogenetic trees showing the phylogenetic positions of the Miyazaki-Bali/2007 strain and other orthoreovirus strains based on deduced amino acid sequence of the sigma C protein (A), major inner capsid protein (B), sigma NS protein (C), and major outer capsid protein (D) listed in Table 1.

Atsushi Yamanaka (340147)
Akira Iwakiri (542649)
Tomoki Yoshikawa (367816)
Kouji Sakai (498530)
Harpal Singh (273486)
Daisuke Himeji (542650)
Ikuo Kikuchi (542651)
Akira Ueda (542652)
Seigo Yamamoto (542653)
Miho Miura (542654)
Yoko Shioyama (542655)
Kimiko Kawano (513348)
Tokiko Nagaishi (542656)
Minako Saito (542657)
Masumi Minomo (542658)
Naoyasu Iwamoto (542659)
Yoshio Hidaka (542660)
Hirotoshi Sohma (542661)
Takeshi Kobayashi (4712)
Yuta Kanai (114415)
Takehiro Kawagishi (542662)
Noriyo Nagata (389752)
Shuetsu Fukushi (542663)
Tetsuya Mizutani (58974)
Hideki Tani (357985)
Satoshi Taniguchi (542664)
Aiko Fukuma (354021)
Masayuki Shimojima (241787)
Ichiro Kurane (181627)
Tsutomu Kageyama (542665)
Takato Odagiri (247568)
Masayuki Saijo (324701)
Shigeru Morikawa (58979)

March 2014

Bootstrap values for each node are shown by the robustness of the tree. Miyazaki-Bali/2007, the s...

Phylogenetic trees constructed by avian orthoreovirus (ARV) based on nucleotide sequences of the L-class, M-class and σ-class homologous genome segments or genes.

Abstract

Extracted data

Phylogenetic trees constructed by avian orthoreovirus (ARV) based on nucleotide sequences of the L-class, M-class and σ-class homologous genome segments or genes.

Abstract

Extracted data

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