Additional file 5. Immune modulation and inflammation marker expression differs by disease condition. Ridge plots showing the expression of immune and inflammation markers highlighted in Figure 3, separated by disease condition with accompanying tSNE of microglia for reference
Additional file 8. Nanostring GeoMx workflow and ROI segmenting. a Schematic detailing the workflow ...
WOS: 000230781300006PubMed ID: 15876522To evaluate the immunopathogenesis in Rasmussen's encephaliti...
Rasmussen's encephalitis is a rare chronic neurological disorder, characterised by unilateral inflam...
Additional file 7. Top PDEGs highlight diversity of pseudotime trajectories. Scatter plots of cells ...
Additional file 3. Microglial markers and DEGs in microglial Louvain clusters. a tSNE plot of microg...
Additional file 4. Sample and disease condition contribution to microglial clusters. a Side-by-side ...
Additional file 10. CD45+ ROI segment protein expression. Heatmap showing protein expression of 42 p...
Additional file 9. IBA1+ ROI segment protein expression. Heatmap showing protein expression of 42 pr...
Additional file 1. QC and cell typing for snRNA-seq data. a, b tSNE plots showing raw RNA and UMI co...
Additional file 2. Overlap of DEGs in RE relative to FCD and CTRL. a,b Venn diagrams showing the num...
Additional file 11. DEP gene expression in microglia snRNA-Seq. a Volcano plot of significant abunda...
Additional file 13: Table S2. Differentially Expressed Genes in Microglia, RE vs FCD
Additional file 14: Table S3. Top Highly Differentially Expressed Genes in Microglia Subpopulations
Additional file 12: Table S1. Differentially Expressed Genes in Microglia, RE vs CTRL
Additional file 6. Pseudotime trajectory analysis. a UMAP plot of microglia showing all eleven Louva...
Additional file 8. Nanostring GeoMx workflow and ROI segmenting. a Schematic detailing the workflow ...
WOS: 000230781300006PubMed ID: 15876522To evaluate the immunopathogenesis in Rasmussen's encephaliti...
Rasmussen's encephalitis is a rare chronic neurological disorder, characterised by unilateral inflam...
Additional file 7. Top PDEGs highlight diversity of pseudotime trajectories. Scatter plots of cells ...
Additional file 3. Microglial markers and DEGs in microglial Louvain clusters. a tSNE plot of microg...
Additional file 4. Sample and disease condition contribution to microglial clusters. a Side-by-side ...
Additional file 10. CD45+ ROI segment protein expression. Heatmap showing protein expression of 42 p...
Additional file 9. IBA1+ ROI segment protein expression. Heatmap showing protein expression of 42 pr...
Additional file 1. QC and cell typing for snRNA-seq data. a, b tSNE plots showing raw RNA and UMI co...
Additional file 2. Overlap of DEGs in RE relative to FCD and CTRL. a,b Venn diagrams showing the num...
Additional file 11. DEP gene expression in microglia snRNA-Seq. a Volcano plot of significant abunda...
Additional file 13: Table S2. Differentially Expressed Genes in Microglia, RE vs FCD
Additional file 14: Table S3. Top Highly Differentially Expressed Genes in Microglia Subpopulations
Additional file 12: Table S1. Differentially Expressed Genes in Microglia, RE vs CTRL
Additional file 6. Pseudotime trajectory analysis. a UMAP plot of microglia showing all eleven Louva...
Additional file 8. Nanostring GeoMx workflow and ROI segmenting. a Schematic detailing the workflow ...
WOS: 000230781300006PubMed ID: 15876522To evaluate the immunopathogenesis in Rasmussen's encephaliti...
Rasmussen's encephalitis is a rare chronic neurological disorder, characterised by unilateral inflam...