Applying a cutoff for barcode abundance eliminates most recall of longer barcodes that were not intended in the original design for a 12-nucleotide barcode library. These barcodes are derived from the L3 clustering. The y-axis is square root-transformed so low values are more visible.</p
The diversity and scope of multiplex parallel sequencing applications is steadily increasing. Critic...
The y-axis depicts the barcode sequence; the x-axis shows the square root-transformed percentage of ...
<p>Once all the forward and reverse reads from the Illumina sequencer are joined one can see – in gr...
Linker sequences are trimmed with Cutadapt (colors represent distinct barcodes). Clustering is perfo...
This figure shows that the number of barcodes that are called decreases with the increasing clusteri...
The figure represents the pairwise Levenshtein distances between centroids in the plasmid library af...
We consider the design and evaluation of short barcodes, with a length between six and eight nucleot...
We consider the design and evaluation of short barcodes, with a length between six and eight nucleot...
A. L3 clustering distance of barcodes along with a 99% cumulative count cutoff was applied to the th...
Random DNA barcodes are a versatile tool for tracking cell lineages, with applications ranging from ...
The diversity and scope of multiplex parallel sequencing applications is steadily increasing. Critic...
Short DNA oligonucleotides (~4 mer) have been used to index samples from different sources, such as ...
Random DNA barcodes are a versatile tool for tracking cell lineages, with applications ranging from ...
The diversity and scope of multiplex parallel sequencing applications is steadily increasing. Critic...
Short DNA oligonucleotides (~4 mer) have been used to index samples from different sources, such as ...
The diversity and scope of multiplex parallel sequencing applications is steadily increasing. Critic...
The y-axis depicts the barcode sequence; the x-axis shows the square root-transformed percentage of ...
<p>Once all the forward and reverse reads from the Illumina sequencer are joined one can see – in gr...
Linker sequences are trimmed with Cutadapt (colors represent distinct barcodes). Clustering is perfo...
This figure shows that the number of barcodes that are called decreases with the increasing clusteri...
The figure represents the pairwise Levenshtein distances between centroids in the plasmid library af...
We consider the design and evaluation of short barcodes, with a length between six and eight nucleot...
We consider the design and evaluation of short barcodes, with a length between six and eight nucleot...
A. L3 clustering distance of barcodes along with a 99% cumulative count cutoff was applied to the th...
Random DNA barcodes are a versatile tool for tracking cell lineages, with applications ranging from ...
The diversity and scope of multiplex parallel sequencing applications is steadily increasing. Critic...
Short DNA oligonucleotides (~4 mer) have been used to index samples from different sources, such as ...
Random DNA barcodes are a versatile tool for tracking cell lineages, with applications ranging from ...
The diversity and scope of multiplex parallel sequencing applications is steadily increasing. Critic...
Short DNA oligonucleotides (~4 mer) have been used to index samples from different sources, such as ...
The diversity and scope of multiplex parallel sequencing applications is steadily increasing. Critic...
The y-axis depicts the barcode sequence; the x-axis shows the square root-transformed percentage of ...
<p>Once all the forward and reverse reads from the Illumina sequencer are joined one can see – in gr...