The distance distribution between complementary base pairs of the two strands of a DNA molecule is studied near the melting transition. Scaling arguments are presented for a generalized Poland-Scheraga-type model that includes self-avoiding interactions. At the transition temperature and for a large distance r, the distribution decays as 1/r(kappa) with kappa=1+(c-2)/nu. Here nu is the self-avoiding walk correlation length exponent and c is the exponent associated with the entropy of an open loop in the chain. Results for the distribution function just below the melting point are also presented. Numerical simulations that fully take into account the self-avoiding interactions are in good agreement with the scal...
The complexity of the primary structure of human DNA is explored using methods from nonequilibrium s...
AbstractThe stability of a DNA double helix of any particular sequence is conventionally estimated a...
We recently proposed a dynamical mesoscopic model for DNA, which is based, like the statistical ones...
We perform an extensive numerical study of the disordered Poland–Scheraga (PS) model for DNA denatur...
When double-stranded DNA molecules are heated, or exposed to denaturing agents, the two strands are ...
We investigated how the finiteness of the length of the sequence affects the phase transition that t...
AbstractKey biological and nano-technological processes require the partial or complete association ...
We study numerically the effect of sequence heterogeneity on the thermodynamic properties of a Pola...
Abstract. Existing experimental studies of the thermal denaturation of DNA yield sharp steps in the ...
Recent measurements of the distribution of end-to-end distance in short DNA molecules infer cooperat...
AbstractRecent measurements of the distribution of end-to-end distance in short DNA molecules infer ...
This work deals with the development and the analysis of the properties of new DNA models, in order ...
Melting transition of double-stranded oligonucleotide sequences, in contact with a Langevin fluctuat...
We show that a simple lattice model can provide a unified description of the thermal denaturation of...
Poland–Scheraga models were introduced to describe the DNA denaturation transition. We give a rigoro...
The complexity of the primary structure of human DNA is explored using methods from nonequilibrium s...
AbstractThe stability of a DNA double helix of any particular sequence is conventionally estimated a...
We recently proposed a dynamical mesoscopic model for DNA, which is based, like the statistical ones...
We perform an extensive numerical study of the disordered Poland–Scheraga (PS) model for DNA denatur...
When double-stranded DNA molecules are heated, or exposed to denaturing agents, the two strands are ...
We investigated how the finiteness of the length of the sequence affects the phase transition that t...
AbstractKey biological and nano-technological processes require the partial or complete association ...
We study numerically the effect of sequence heterogeneity on the thermodynamic properties of a Pola...
Abstract. Existing experimental studies of the thermal denaturation of DNA yield sharp steps in the ...
Recent measurements of the distribution of end-to-end distance in short DNA molecules infer cooperat...
AbstractRecent measurements of the distribution of end-to-end distance in short DNA molecules infer ...
This work deals with the development and the analysis of the properties of new DNA models, in order ...
Melting transition of double-stranded oligonucleotide sequences, in contact with a Langevin fluctuat...
We show that a simple lattice model can provide a unified description of the thermal denaturation of...
Poland–Scheraga models were introduced to describe the DNA denaturation transition. We give a rigoro...
The complexity of the primary structure of human DNA is explored using methods from nonequilibrium s...
AbstractThe stability of a DNA double helix of any particular sequence is conventionally estimated a...
We recently proposed a dynamical mesoscopic model for DNA, which is based, like the statistical ones...