The blue (red) dots show the simulated mRNA concentration (copy number) distribution for the three-stage model with a cell volume description obtained from SSA. The blue (red) curves show the simulated mRNA concentration (copy number) distribution for the bursty model with a cell volume description obtained from SSA. The parameters for the three-stage model are chosen as N0 = 0.2N, β = 1, κ = 2, α0 = α1 = 1, v = 10f, d = f, s = 0.2r, u = v. The parameters for the bursty model are chosen as N0 = 0.2N, B = 0.2, β = 1, κ = 2, α0 = α1 = 1, v = 10f, where v is the degradation rate of mRNA. The growth rate g is determined so that f = 2 for the bursty model. The parameter ρ and a are chosen so that the mean mRNA number 〈n〉 = 25 and the mean cell v...
<div><p>(A) Scatterplot of total GFP and mRNA numbers in individual cells from cell line L-GFP-M1-7x...
E-Carlo simulation of half-vs-half microarray data, based on transcript distributions and estimation...
<p>(a) Study flow diagram. Red color indicates blocks/functions simulated in this study. Dashed bloc...
The blue (red) dots show the simulated protein concentration (copy number) distribution for the thre...
The blue (red) dots show the simulated concentration (copy number) distribution for the full model o...
A: A detailed stochastic model with both cell size and gene expression descriptions. The model consi...
A-C: The copy number (red curve) and concentration (blue curve) distributions display different shap...
(a) Schematic of the standard bursting gene expression model. Parameters are defined as given in the...
The blue (red) dots show the simulated concentration (copy number) distribution for the full model o...
<p>Experimental data shown in blue, fitted simulated data shown in red. A. Ratio of larger cell volu...
Tions and compared to observed data. The experimental log intensity ratio distribution (broad green ...
A: The mRNA copy number (red curve) and concentration (blue curve) distributions for the HTB1 gene. ...
<p>Panel (a) shows the exponential lifetime density (red) defined in (1) and the gamma density wit...
<div><p>(A) Histograms showing the distribution of mRNA molecules per cell for three doxycycline con...
Here Xk denotes the gene product at stage k and bk denotes the burst size at stage k. Moreover, vk i...
<div><p>(A) Scatterplot of total GFP and mRNA numbers in individual cells from cell line L-GFP-M1-7x...
E-Carlo simulation of half-vs-half microarray data, based on transcript distributions and estimation...
<p>(a) Study flow diagram. Red color indicates blocks/functions simulated in this study. Dashed bloc...
The blue (red) dots show the simulated protein concentration (copy number) distribution for the thre...
The blue (red) dots show the simulated concentration (copy number) distribution for the full model o...
A: A detailed stochastic model with both cell size and gene expression descriptions. The model consi...
A-C: The copy number (red curve) and concentration (blue curve) distributions display different shap...
(a) Schematic of the standard bursting gene expression model. Parameters are defined as given in the...
The blue (red) dots show the simulated concentration (copy number) distribution for the full model o...
<p>Experimental data shown in blue, fitted simulated data shown in red. A. Ratio of larger cell volu...
Tions and compared to observed data. The experimental log intensity ratio distribution (broad green ...
A: The mRNA copy number (red curve) and concentration (blue curve) distributions for the HTB1 gene. ...
<p>Panel (a) shows the exponential lifetime density (red) defined in (1) and the gamma density wit...
<div><p>(A) Histograms showing the distribution of mRNA molecules per cell for three doxycycline con...
Here Xk denotes the gene product at stage k and bk denotes the burst size at stage k. Moreover, vk i...
<div><p>(A) Scatterplot of total GFP and mRNA numbers in individual cells from cell line L-GFP-M1-7x...
E-Carlo simulation of half-vs-half microarray data, based on transcript distributions and estimation...
<p>(a) Study flow diagram. Red color indicates blocks/functions simulated in this study. Dashed bloc...