(a)-(d) use significant genes from the edgeR Exact, SAMSeq, EBSeq, DESeq2, and Voom methods; (e)—(h) use significant genes from the DESeq2, NOISeq, SAMSeq, baySeq, DESeq methods.</p
Background. A common research goal in transcriptome projects is to find genes that are differentiall...
<p>The diagrams show the genes that are exclusive to each treatment and those that are shared by two...
<p>(A) compares DE genes among the three <i>spt5</i> mutants <i>(spt5–194, spt5–4,</i> and <i>spt5–2...
<p>Two RNA-Seq datasets with one replicate (A) and two replicates (B) in each class. Five different ...
<p>Venn diagram showing the genes identified as DE by the three different statistical methods (DEseq...
<p>A: Venn diagram summarizing the overlap between differentially expressed genes from RNA-Seq (<i>l...
<p>Venn diagram showing differentially expressed genes that were identified by mRNAseq coupled to th...
<p>Venn diagram showing the number of DE genes in each group comparison as well as the numbers of ge...
<p>N represents the total number of common genes and the main categories in which genes are clustere...
<p>Venn diagram shows the intersection of the DEGs obtained from Cufflink and DESeq analysis and DEG...
<p>For final analyses we selected 9344 and 7494 genes for which sense transcripts were detected by S...
<p>The big ovals represent the number of the significant DE genes found by the four methods: Cufflin...
<p>The total number of genes modified by ME (gray circles) and IE (white circles) (A), or up- (B) an...
<p>(A) Numbers of the overlapping and non-overlapping upregulated genes. (B) Number of the overlappi...
<p>Venn diagrams depicting number of unique and shared differentially-expressed genes.</p
Background. A common research goal in transcriptome projects is to find genes that are differentiall...
<p>The diagrams show the genes that are exclusive to each treatment and those that are shared by two...
<p>(A) compares DE genes among the three <i>spt5</i> mutants <i>(spt5–194, spt5–4,</i> and <i>spt5–2...
<p>Two RNA-Seq datasets with one replicate (A) and two replicates (B) in each class. Five different ...
<p>Venn diagram showing the genes identified as DE by the three different statistical methods (DEseq...
<p>A: Venn diagram summarizing the overlap between differentially expressed genes from RNA-Seq (<i>l...
<p>Venn diagram showing differentially expressed genes that were identified by mRNAseq coupled to th...
<p>Venn diagram showing the number of DE genes in each group comparison as well as the numbers of ge...
<p>N represents the total number of common genes and the main categories in which genes are clustere...
<p>Venn diagram shows the intersection of the DEGs obtained from Cufflink and DESeq analysis and DEG...
<p>For final analyses we selected 9344 and 7494 genes for which sense transcripts were detected by S...
<p>The big ovals represent the number of the significant DE genes found by the four methods: Cufflin...
<p>The total number of genes modified by ME (gray circles) and IE (white circles) (A), or up- (B) an...
<p>(A) Numbers of the overlapping and non-overlapping upregulated genes. (B) Number of the overlappi...
<p>Venn diagrams depicting number of unique and shared differentially-expressed genes.</p
Background. A common research goal in transcriptome projects is to find genes that are differentiall...
<p>The diagrams show the genes that are exclusive to each treatment and those that are shared by two...
<p>(A) compares DE genes among the three <i>spt5</i> mutants <i>(spt5–194, spt5–4,</i> and <i>spt5–2...