Performance of cell and velocity embeddings on simulated data, compared to ground truth velocity directions.
- Gennady Gorin (8466255)
- Meichen Fang (13775419)
- Tara Chari (13775422)
- Lior Pachter (54416)
Publication date
September 2022
DOI Publisher
Public Library of Science (PLoS)Abstract
a. Linear PCA embedding of ground truth velocities. b. Linear PCA embedding of inferred velocities. c. Nonlinear PCA embedding of inferred velocities. d. Nonlinear, Boolean PCA embedding of inferred velocities. e. Embedding of ground truth principal curve; trajectory directions displayed to guide the eye. f. Distribution of cell-specific angle deviations relative to ground truth velocity directions.</p
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