QQ plots for univariate models for mCHG levels (A) and conditional models for mCHG|mCHH (B) in RdDM-targeted transposons (left) and CMT2-targeted transposons (right). (PDF)</p
Manhattan plots summarizing the genome-wide association study (GWAS) results for two quantitative tr...
<p>Cumulative distribution of <i>P</i>-values was computed from the DNA markers and phenotypes for t...
<p>a: PINK NECK trait for SNP GWAS; b: PINK trait for SNP GWAS; c: PINK NECK trait for Haplotype GWA...
Quantile-quantile plots of the GWAS results with corresponding genomic control factors (lambda) are ...
The scatter plots illustrate the allelic effects on mCHH (A from [1]) and mCHG|mCHH in RdDM- (B) and...
The genetic effects on mCHH in RdDM- and CMT2-targeted transposons were analyzed by the conditional ...
The analysis was done separately for (A) RdDM-targeted and (B) CMT2-targeted transposons, using the ...
Zoomed-in Manhattan plots around conditional GWAS peaks in Fig 2 for (A) RdDM- and (B) CMT2-targeted...
The x-axis and y-axis represent −log10 transformed expected p-values and observed p-values, respecti...
Each arrow shows the mean value shift of mCHH and mCHG levels from reference to the alternative alle...
<p>The straight line in the Q-Q plot indicates the distribution of SNPs under the null hypothesis.</...
(A) Cumulative effect on mCHG|mCHH. Chr1:4035022 (JMJ26) was excluded from the analysis of CMT2-targ...
<p>Quantile-quantile plot (QQ-plot) of raw p-values from univariate GWAS analysis adjusting for popu...
Black lines show unconditional distributions. Coloured lines show the distributions conditional on m...
<p>Quantile-Quantile plots for the GWAS of (A) AlrL-Prn, (B) EyeL-Nsn, (C) EyeL-EyeR, and (D) ZygR-N...
Manhattan plots summarizing the genome-wide association study (GWAS) results for two quantitative tr...
<p>Cumulative distribution of <i>P</i>-values was computed from the DNA markers and phenotypes for t...
<p>a: PINK NECK trait for SNP GWAS; b: PINK trait for SNP GWAS; c: PINK NECK trait for Haplotype GWA...
Quantile-quantile plots of the GWAS results with corresponding genomic control factors (lambda) are ...
The scatter plots illustrate the allelic effects on mCHH (A from [1]) and mCHG|mCHH in RdDM- (B) and...
The genetic effects on mCHH in RdDM- and CMT2-targeted transposons were analyzed by the conditional ...
The analysis was done separately for (A) RdDM-targeted and (B) CMT2-targeted transposons, using the ...
Zoomed-in Manhattan plots around conditional GWAS peaks in Fig 2 for (A) RdDM- and (B) CMT2-targeted...
The x-axis and y-axis represent −log10 transformed expected p-values and observed p-values, respecti...
Each arrow shows the mean value shift of mCHH and mCHG levels from reference to the alternative alle...
<p>The straight line in the Q-Q plot indicates the distribution of SNPs under the null hypothesis.</...
(A) Cumulative effect on mCHG|mCHH. Chr1:4035022 (JMJ26) was excluded from the analysis of CMT2-targ...
<p>Quantile-quantile plot (QQ-plot) of raw p-values from univariate GWAS analysis adjusting for popu...
Black lines show unconditional distributions. Coloured lines show the distributions conditional on m...
<p>Quantile-Quantile plots for the GWAS of (A) AlrL-Prn, (B) EyeL-Nsn, (C) EyeL-EyeR, and (D) ZygR-N...
Manhattan plots summarizing the genome-wide association study (GWAS) results for two quantitative tr...
<p>Cumulative distribution of <i>P</i>-values was computed from the DNA markers and phenotypes for t...
<p>a: PINK NECK trait for SNP GWAS; b: PINK trait for SNP GWAS; c: PINK NECK trait for Haplotype GWA...
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