Benchmark of 5S, 16S, 23S rRNA secondary structures taken from the CRW database https://crw-site.chemistry.gatech.edu/ Each molecule is available in bpseq, ct and dot-bracket-letter (db) format. For each format a version without header/additional information/comments is available in the corresponding bpseq-nH, ct-nH, db-nH folders. In the files Archaea.xlsx, Bacteria.xlsx and Eukaryota.xslx the molecules in the benchmark are listed together with their Organism Name, ID and Phylogenetic classification (up to Order) according to the European Nucleotide Archive (ENA) taxonomy https://www.ebi.ac.uk/ena/browser/home The accession number is available from the headers of the bpseq and ct formats. </p
Accurate secondary structures are important for understanding ribosomes, which are extremely large a...
Since its discovery in the 1970s, 16S rRNA gene is the go-to biomolecule for determining phylogeneti...
Rapid and reliable identification of bacterial pathogens directly from patient samples is required f...
While the majority of the ribosomal RNA structure is conserved in the three major domains of life – ...
The Ribonuclease P Sequence database is a compilation of RNase P sequences, sequence alignments, sec...
Background: Comparative analysis of RNA sequences is the basis for the detailed and accurate predict...
While the majority of the ribosomal RNA structure is conserved in the three major domains of life--a...
Discovery and characterization of functional RNA structures remains challenging due to deficiencies ...
<p>The <i>P. falciparum</i> mt SSU rRNA secondary structure model is superimposed onto the <i>E. col...
The ribosomal RNA database in Antwerp (Belgium) offers extensive alignments of both small and large ...
<p>The base pairings, helices other RNA structural elements, and relevant ribosomal proteins in the ...
The Antwerp database on targe subunit ribosomal RNA now contains 607 complete or nearly complete ali...
Accurate secondary structures are important for understanding ribosomes, which are extremely large a...
The .zip archive contains the bacterial 16S and 23S rRNA gene sequence database that is shipped with...
The database on small ribosomal subunit RNA structure contained 1804 nucleotide sequences on April 2...
Accurate secondary structures are important for understanding ribosomes, which are extremely large a...
Since its discovery in the 1970s, 16S rRNA gene is the go-to biomolecule for determining phylogeneti...
Rapid and reliable identification of bacterial pathogens directly from patient samples is required f...
While the majority of the ribosomal RNA structure is conserved in the three major domains of life – ...
The Ribonuclease P Sequence database is a compilation of RNase P sequences, sequence alignments, sec...
Background: Comparative analysis of RNA sequences is the basis for the detailed and accurate predict...
While the majority of the ribosomal RNA structure is conserved in the three major domains of life--a...
Discovery and characterization of functional RNA structures remains challenging due to deficiencies ...
<p>The <i>P. falciparum</i> mt SSU rRNA secondary structure model is superimposed onto the <i>E. col...
The ribosomal RNA database in Antwerp (Belgium) offers extensive alignments of both small and large ...
<p>The base pairings, helices other RNA structural elements, and relevant ribosomal proteins in the ...
The Antwerp database on targe subunit ribosomal RNA now contains 607 complete or nearly complete ali...
Accurate secondary structures are important for understanding ribosomes, which are extremely large a...
The .zip archive contains the bacterial 16S and 23S rRNA gene sequence database that is shipped with...
The database on small ribosomal subunit RNA structure contained 1804 nucleotide sequences on April 2...
Accurate secondary structures are important for understanding ribosomes, which are extremely large a...
Since its discovery in the 1970s, 16S rRNA gene is the go-to biomolecule for determining phylogeneti...
Rapid and reliable identification of bacterial pathogens directly from patient samples is required f...