Water models with realistic physical-chemical properties are essential to study a variety of biomedical processes or engineering technologies involving molecules or nanomaterials. Atomistic models of water are constrained by the feasible computational capacity, but calibrated coarse-grained (CG) ones can go beyond these limits. Here, we compare three popular atomistic water models with their corresponding CG model built using finite-size particles such as ellipsoids. Differently from previous approaches, short-range interactions are accounted for with the generalized Gay-Berne potential, while electrostatic and long-range interactions are computed from virtual charges inside the ellipsoids. Such an approach leads to a quantitative agreement...
Perspective ArticleInternational audienceElectrokinetic phenomena are of great practical importance ...
Simulation of the dynamics of a protein in aqueous solution using an atomic model for both the prote...
We employ the inverse Boltzmann method to coarse-grain three commonly used three-site water models (...
The necessity for accurate and computationally efficient representations of water in atomistic simul...
Multiscale simulations methods, such as adaptive resolution scheme, are becoming increasingly popula...
Hybrid molecular dynamics simulations of atomistic (AA) solutes embedded in coarse-grained (CG) envi...
Hybrid molecular dynamics simulations of atomistic (AA) solutes embedded in coarse-grained (CG) envi...
Molecular simulations of water using classical, molecular mechanic potential energy functions have e...
Hybrid molecular dynamics simulations of atomistic (AA) solutes embedded in coarse-grained (CG) envi...
This dataset contains data for the simulation of atomistic and coarse-grained (MOLC) water models. ...
Hybrid molecular dynamics simulations of atomistic (AA) solutes embedded in coarse-grained (CG) envi...
Coarse-grained (CG) simulations have become an essential tool to study a large variety of biomolecul...
In this work, we propose a new coarse-grained (CG) model for water by combining the features of two ...
Electronic coarse graining is a technique improving the predictive power of molecular dynamics simu...
We present an adaptive resolution simulation of protein G in multiscale water. We couple atomistic w...
Perspective ArticleInternational audienceElectrokinetic phenomena are of great practical importance ...
Simulation of the dynamics of a protein in aqueous solution using an atomic model for both the prote...
We employ the inverse Boltzmann method to coarse-grain three commonly used three-site water models (...
The necessity for accurate and computationally efficient representations of water in atomistic simul...
Multiscale simulations methods, such as adaptive resolution scheme, are becoming increasingly popula...
Hybrid molecular dynamics simulations of atomistic (AA) solutes embedded in coarse-grained (CG) envi...
Hybrid molecular dynamics simulations of atomistic (AA) solutes embedded in coarse-grained (CG) envi...
Molecular simulations of water using classical, molecular mechanic potential energy functions have e...
Hybrid molecular dynamics simulations of atomistic (AA) solutes embedded in coarse-grained (CG) envi...
This dataset contains data for the simulation of atomistic and coarse-grained (MOLC) water models. ...
Hybrid molecular dynamics simulations of atomistic (AA) solutes embedded in coarse-grained (CG) envi...
Coarse-grained (CG) simulations have become an essential tool to study a large variety of biomolecul...
In this work, we propose a new coarse-grained (CG) model for water by combining the features of two ...
Electronic coarse graining is a technique improving the predictive power of molecular dynamics simu...
We present an adaptive resolution simulation of protein G in multiscale water. We couple atomistic w...
Perspective ArticleInternational audienceElectrokinetic phenomena are of great practical importance ...
Simulation of the dynamics of a protein in aqueous solution using an atomic model for both the prote...
We employ the inverse Boltzmann method to coarse-grain three commonly used three-site water models (...