The aim of the Swedish-Japanese EISCAT campaign in February 1999 was to measure the ionospheric parameters inside and outside the auroral arcs. The ion line radar experiment was optimised to probe the E-region and lower F-region with as high a speed as possible. Two extra channels were used for the plasma line measurements covering the same altitudes, giving a total of 3 upshifted and 3 downshifted frequency bands of 25 kHz each. For most of the time the shifted channels were tuned to 3 (both), 4 (up), 5.5 (down) and 6.5 (both) MHz. Weak plasma line signals are seen whenever the radar is probing the diffuse aurora, corresponding to the relatively low plasma frequencies. At times when auroral arcs pass the radar beam, significant increases i...