International audienceAn efficient algorithm to simultaneously implement array alignment and data/computation distribution is introduced and evaluated. We re-visit previous work of Li and Chen (J. Li and M. Chen, 1990; 1991), and we show that their alignment step should not be conducted without preserving the potential parallelism. In other words, the optimal alignment may well sequentialize computations, whatever the distribution afterwards. We provide an efficient algorithm that handles alignment and data/computation distribution simultaneously. The good news is that several important instances of the whole alignment/distribution problem have polynomial complexity, while alignment itself is NP-complete (J. Li and M. Chen, 1990
Dress A, Füllen G, Perrey S. A Divide and Conquer Approach to Multiple Alignment. In: Rawlings C, Cl...
Implementing a data-parallel language such as Formm 90 on a distn_outed-memory parallel computer req...
In this paper some of the most fundamental problems in computational biology are proved intractable....
International audienceAn efficient algorithm to simultaneously implement array alignment and data/co...
In this paper, an efficient algorithm to simultaneously implement array alignment and data/computati...
Axis and stride alignment is an important optimization in compiling data-parallel programs for distr...
Aggregate data objects (such as arrays) are distributed across the processor memories when compilin...
Data and computation alignment is an important part of compiling sequential programs to architecture...
We consider distribution at compile time of the array data in a distributed-memory implementation of...
[[abstract]]©1997 Springer Verlag-Both automatic data alignment and array operation synthesis have b...
We present an intermediate representation of a program called the Alignment-Distribution Graph that ...
This paper describes an automatic data distribution method which deal with both the alignment and th...
Abstract. In this paper some of the most fundamental problems in computational biology are proved in...
\u3cp\u3eConformance checking is considered to be anything where observed behaviour needs to be rela...
Multiple sequence alignment is one of the dominant problems in computational molecular biology. Num...
Dress A, Füllen G, Perrey S. A Divide and Conquer Approach to Multiple Alignment. In: Rawlings C, Cl...
Implementing a data-parallel language such as Formm 90 on a distn_outed-memory parallel computer req...
In this paper some of the most fundamental problems in computational biology are proved intractable....
International audienceAn efficient algorithm to simultaneously implement array alignment and data/co...
In this paper, an efficient algorithm to simultaneously implement array alignment and data/computati...
Axis and stride alignment is an important optimization in compiling data-parallel programs for distr...
Aggregate data objects (such as arrays) are distributed across the processor memories when compilin...
Data and computation alignment is an important part of compiling sequential programs to architecture...
We consider distribution at compile time of the array data in a distributed-memory implementation of...
[[abstract]]©1997 Springer Verlag-Both automatic data alignment and array operation synthesis have b...
We present an intermediate representation of a program called the Alignment-Distribution Graph that ...
This paper describes an automatic data distribution method which deal with both the alignment and th...
Abstract. In this paper some of the most fundamental problems in computational biology are proved in...
\u3cp\u3eConformance checking is considered to be anything where observed behaviour needs to be rela...
Multiple sequence alignment is one of the dominant problems in computational molecular biology. Num...
Dress A, Füllen G, Perrey S. A Divide and Conquer Approach to Multiple Alignment. In: Rawlings C, Cl...
Implementing a data-parallel language such as Formm 90 on a distn_outed-memory parallel computer req...
In this paper some of the most fundamental problems in computational biology are proved intractable....