Imagine that we have access to a simulator that models the behaviour of some complex numerical task. Being considered as a black box, we can only get useful information by running the simulator with different inputs. For example, the process of inferring the 3D structure of a protein from its amino-acid sequence can be regarded as such a complex task, that can be modelled by a simulator. The inputs of the simulator are the amino-acid sequences and the outputs are the predicted 3D structures. A popular family of methods seek to optimize a suitable energy function – produced by the simulator – that describes the relation between the structure of a protein and its amino-acid sequence. These meth- ods are of interest because they are able to bu...
La modélisation de phénomènes complexes rencontrés dans les problématiques industrielles peut condui...
Discrete and stochastic models in systems biology, such as biochemical reaction networks, can be mod...
Machine Learning has received a lot of attention during the last two decades, both from industry for...
Imagine that we have access to a simulator that models the behaviour of some complex numerical task....
Imaginons que nous ayons accès à un simulateur qui modélise le comportement d’une tâche numérique co...
peer reviewedSimulated annealing is a widely used stochastic optimization algorithm whose efficiency...
When designing or developing optimization algorithms, test functions are crucial to evaluate perfor...
In the eld of molecular evolution, so called Structurally constrained (SC) models have been developp...
In this paper we address the problem of tuning parameters of a biological model, in particular a sim...
Le dessin computationnel de protéine, ou CPD, est une technique qui permet de modifier les protéines...
Thanks to recent technological breakthroughs and the arrival of new generation sequencers, the amoun...
Study of complex systems such as environmental or urban systems, often requires the use of simulator...
Simulation-based optimization is an efficient approach to resolve stochastic problems with continuou...
Continuous progress in screening and high-throughput sequencing techniques in recent years paves the...
La modélisation de phénomènes complexes rencontrés dans les problématiques industrielles peut condui...
Discrete and stochastic models in systems biology, such as biochemical reaction networks, can be mod...
Machine Learning has received a lot of attention during the last two decades, both from industry for...
Imagine that we have access to a simulator that models the behaviour of some complex numerical task....
Imaginons que nous ayons accès à un simulateur qui modélise le comportement d’une tâche numérique co...
peer reviewedSimulated annealing is a widely used stochastic optimization algorithm whose efficiency...
When designing or developing optimization algorithms, test functions are crucial to evaluate perfor...
In the eld of molecular evolution, so called Structurally constrained (SC) models have been developp...
In this paper we address the problem of tuning parameters of a biological model, in particular a sim...
Le dessin computationnel de protéine, ou CPD, est une technique qui permet de modifier les protéines...
Thanks to recent technological breakthroughs and the arrival of new generation sequencers, the amoun...
Study of complex systems such as environmental or urban systems, often requires the use of simulator...
Simulation-based optimization is an efficient approach to resolve stochastic problems with continuou...
Continuous progress in screening and high-throughput sequencing techniques in recent years paves the...
La modélisation de phénomènes complexes rencontrés dans les problématiques industrielles peut condui...
Discrete and stochastic models in systems biology, such as biochemical reaction networks, can be mod...
Machine Learning has received a lot of attention during the last two decades, both from industry for...