We describe a general approach to transforming molecular models between different levels of resolution, based on machine learning methods. The approach uses a matched set of models at both levels of resolution for training, but requires only the coordinates of their particles and no side information (e.g., templates for substructures, defined mappings, or molecular mechanics force fields). Once trained, the approach can transform further molecular models of the system between the two levels of resolution in either direction with equal facility
Interdependence across time and length scales is common in biology, where atomic interactions can im...
Predicting structural and energetic properties of a molecular system is one of the fundamental tasks...
Atomistic or ab initio molecular dynamics simulations are widely used to predict thermodynamics and ...
Due to the wide range of timescales that are present in macromolecular systems, hierarchical multisc...
Multiscale techniques bridge what is often mutually excluding in computer models: accuracy and effic...
This thesis explores the interplay of machine learning and molecular physics, demonstrating how deve...
We present an algorithm to reconstruct atomistic structures from their corresponding coarse-grained ...
The conversion of coarse-grained to atomistic models is an important step in obtaining insight about...
Machine learning (ML) has emerged as a pervasive tool in science, engineering, and beyond. Its succe...
From simple clustering techniques to more sophisticated neural networks, the use of machine learning...
The conversion of coarse-grained to atomistic models is an important step in obtaining insight about...
Models are common in chemistry. When these models can be described mathematically, their real world ...
Machine learning has rapidly become a key method for the analysis and organization of large-scale da...
Atomistic or ab-initio molecular dynamics simulations are widely used to predict thermodynamics and ...
Atomistic or ab initio molecular dynamics simulations are widely used to predict thermodynamics and ...
Interdependence across time and length scales is common in biology, where atomic interactions can im...
Predicting structural and energetic properties of a molecular system is one of the fundamental tasks...
Atomistic or ab initio molecular dynamics simulations are widely used to predict thermodynamics and ...
Due to the wide range of timescales that are present in macromolecular systems, hierarchical multisc...
Multiscale techniques bridge what is often mutually excluding in computer models: accuracy and effic...
This thesis explores the interplay of machine learning and molecular physics, demonstrating how deve...
We present an algorithm to reconstruct atomistic structures from their corresponding coarse-grained ...
The conversion of coarse-grained to atomistic models is an important step in obtaining insight about...
Machine learning (ML) has emerged as a pervasive tool in science, engineering, and beyond. Its succe...
From simple clustering techniques to more sophisticated neural networks, the use of machine learning...
The conversion of coarse-grained to atomistic models is an important step in obtaining insight about...
Models are common in chemistry. When these models can be described mathematically, their real world ...
Machine learning has rapidly become a key method for the analysis and organization of large-scale da...
Atomistic or ab-initio molecular dynamics simulations are widely used to predict thermodynamics and ...
Atomistic or ab initio molecular dynamics simulations are widely used to predict thermodynamics and ...
Interdependence across time and length scales is common in biology, where atomic interactions can im...
Predicting structural and energetic properties of a molecular system is one of the fundamental tasks...
Atomistic or ab initio molecular dynamics simulations are widely used to predict thermodynamics and ...