Reaction Coordinates (RCs) are indicators of hidden, low-dimensional mechanisms that govern the long-term behavior of high-dimensional stochastic processes. We present a novel and general variational characterization of optimal RCs and provide conditions for their existence. Optimal RCs are minimizers of a certain loss function and reduced models based on them guarantee very good approximation of the long-term dynamics of the original highdimensional process. We show that, for slow-fast systems, metastable systems, and other systems with known good RCs, the novel theory reproduces previous insight. Remarkably, the numerical e�ort required to evaluate the loss function scales only with the complexity of the underlying, low-dimensiona...
Abstract. A key issue in dimension reduction of dissipative dynamical systems with spectral gaps is ...
Optimal prediction is a general system reduction technique for large sets of differential equations....
We extend the nonparametric framework of reaction coordinate optimization to nonequilibrium ensemble...
Reaction coordinates are indicators of hidden, low-dimensional mechanisms that govern the long-term...
State of the art realistic simulations of complex atomic processes commonly produce trajectories of ...
The dynamic behavior of complex systems with many degrees of freedom is often analyzed by projection...
We consider complex dynamical systems showing metastable behavior but no local separation of fast an...
We present a novel characterization of slow variables for continuous Markov processes that provably ...
In molecular simulations, the identification of suitable reaction coordinates is central to both the...
Abstract We present a novel kernel-based machine learning algorithm for identifying the low-dimens...
Many common kinetic model reduction approaches are explicitly based on inherent multiple time scales...
Essential information about the stationary and slow kinetic properties of macromolecules is containe...
A computationally efficient molecular dynamics method for estimating the rates of rare events that o...
The identification of meaningful reaction coordinates plays a key role in the study of complex molec...
A goal in the kinetic characterization of a macromolecular system is the description of its slow rel...
Abstract. A key issue in dimension reduction of dissipative dynamical systems with spectral gaps is ...
Optimal prediction is a general system reduction technique for large sets of differential equations....
We extend the nonparametric framework of reaction coordinate optimization to nonequilibrium ensemble...
Reaction coordinates are indicators of hidden, low-dimensional mechanisms that govern the long-term...
State of the art realistic simulations of complex atomic processes commonly produce trajectories of ...
The dynamic behavior of complex systems with many degrees of freedom is often analyzed by projection...
We consider complex dynamical systems showing metastable behavior but no local separation of fast an...
We present a novel characterization of slow variables for continuous Markov processes that provably ...
In molecular simulations, the identification of suitable reaction coordinates is central to both the...
Abstract We present a novel kernel-based machine learning algorithm for identifying the low-dimens...
Many common kinetic model reduction approaches are explicitly based on inherent multiple time scales...
Essential information about the stationary and slow kinetic properties of macromolecules is containe...
A computationally efficient molecular dynamics method for estimating the rates of rare events that o...
The identification of meaningful reaction coordinates plays a key role in the study of complex molec...
A goal in the kinetic characterization of a macromolecular system is the description of its slow rel...
Abstract. A key issue in dimension reduction of dissipative dynamical systems with spectral gaps is ...
Optimal prediction is a general system reduction technique for large sets of differential equations....
We extend the nonparametric framework of reaction coordinate optimization to nonequilibrium ensemble...