A shotgun dataset was simulated with the 454sim v1.04 package (Lysholm et al., 2011) using default settings from the genomes of seven E. coli strains, to illustrate the effect on metagenome assembly of multiple closely related genomes. The strains were ABU83972 gi|386637352|ref|NC_017631.1|; BL21_gold gi|253771435|ref|NC_012947.1|; CFT073 gi|26245917|ref|NC_004431.1|; K12_DH10B gi|170079663|ref|NC_010473.1|; O104_H4 gi|410480139|ref|NC_018650.1|; O26_H11 gi|260853213|ref|NC_013361.1| SE11 gi|209917191|ref|NC_011415.1
List of microbial genomes used to construct the simulated metagenome used in an upcoming study. Simu...
Shotgun metagenome data sets of microbial communities are highly diverse, not only due to the natura...
Motivation: A high-quality assembly of reads generated from shotgun sequencing is a substantial step...
Metagenome data sets present a qualitatively different assembly problem than traditional single-orga...
Metagenomics is a rapidly emerging field of research for studying microbial communities. To evaluate...
Metagenomics is a rapidly emerging field of research for studying microbial communities. To evaluate...
textabstractMotivation: Gene assembly is an important step in functional analysis of shotgun metagen...
Background: Metagenomics is the study of the microbial genomes isolated from communities found on ou...
The datasets contains metagenomic and metatranscriptomic Illumina reads simulated for 3 different se...
Gene assembly is an important step in functional analysis of shotgun metagenomic data. Nonetheless, ...
Metagenomic investigations hold great promise for informing the genetics, physiology, and ecology of...
Shotgun metagenomics has greatly advanced our understanding of microbial communities over the last d...
Due to the complexity of the protocols and a limited knowledge of the nature of microbial communitie...
<div><p>Due to the complexity of the protocols and a limited knowledge of the nature of microbial co...
Metagenomics involves the extraction, sequencing and analysis of combined genomic DNA from entire mi...
List of microbial genomes used to construct the simulated metagenome used in an upcoming study. Simu...
Shotgun metagenome data sets of microbial communities are highly diverse, not only due to the natura...
Motivation: A high-quality assembly of reads generated from shotgun sequencing is a substantial step...
Metagenome data sets present a qualitatively different assembly problem than traditional single-orga...
Metagenomics is a rapidly emerging field of research for studying microbial communities. To evaluate...
Metagenomics is a rapidly emerging field of research for studying microbial communities. To evaluate...
textabstractMotivation: Gene assembly is an important step in functional analysis of shotgun metagen...
Background: Metagenomics is the study of the microbial genomes isolated from communities found on ou...
The datasets contains metagenomic and metatranscriptomic Illumina reads simulated for 3 different se...
Gene assembly is an important step in functional analysis of shotgun metagenomic data. Nonetheless, ...
Metagenomic investigations hold great promise for informing the genetics, physiology, and ecology of...
Shotgun metagenomics has greatly advanced our understanding of microbial communities over the last d...
Due to the complexity of the protocols and a limited knowledge of the nature of microbial communitie...
<div><p>Due to the complexity of the protocols and a limited knowledge of the nature of microbial co...
Metagenomics involves the extraction, sequencing and analysis of combined genomic DNA from entire mi...
List of microbial genomes used to construct the simulated metagenome used in an upcoming study. Simu...
Shotgun metagenome data sets of microbial communities are highly diverse, not only due to the natura...
Motivation: A high-quality assembly of reads generated from shotgun sequencing is a substantial step...