Here we present the results of a geoarchaeological study, undertaken in Upper Egypt, in the western part of the Karnak Temple and in Coptos. The geoarchaeological approach helps to better understand the fluvial dynamics of the Nile River in the close vicinity of these two Pharaonic sites, 35 km apart. Our investigation focused on i) a jetty discovered by the archaeologists of the Supreme Council of Antiquities (SCA) in front of the first pylon at Karnak and ii) the remains of Ancient Coptos, an important site from Predynastic to Roman times. We studied several stratigraphic profiles, manual boreholes (maximum depth of 5.5 m) and percussion drillings (maximum depth of 25 m). Sedimentological and magnetic susceptibility analyses help to chara...