Thesis „Distance methods for reconstruction phylogenetic trees“ summarizes notes about methods for calculating evolutionary distances from aligned nucleotide, eminoacid or codon sequences. Then using these distances in methods for reconstructing phylogenetic trees from matrixes made of these distances. Aim is to create these method as a functional scripts in MATLAB software and appliance these method on real sequences downloaded from public databanks on internet in FASTA format, and to create a thesis about hese methods and describe them and my results
International audienceRecently developed MinHash-based techniques were proven successful in quickly ...
International audienceWith the continuous growth of genome sequencing capabilities, phylogenetic tre...
Data Mining is a branch of knowledge discovery in the field of research and development. The biologi...
International audienceA popular approach in phylogenetics consists in estimating a matrix of evoluti...
We define a compression distance, based on a normal compressor to show it is an admissible distance....
Izgradnja filogenetskog stabla kreće izračunom matrice udaljenosti. Udaljenosti se računaju po Jukes...
Phylogenetics is one of the dominant data engineering research disciplines based on biological infor...
International audienceSeveral popular methods for inferring evolutionary trees (or for hierarchical ...
We have developed an alignment-free method that calculates phylogenetic distances using a maximum-li...
International audienceA phylogeny is an evolutionary tree tracing the shared history, including comm...
(1) A mathematical theory for computing the probabilities of various nucleotide configurations is de...
Phylogenetics is the study of the evolutionary relationships among different species through the ana...
Abstract.—Methods, such as the distance Wagner procedure, that construct phylogenetic trees by fitti...
These lecture notes are the result of a series of lectures given by Martin Vingron (MPI/FU Berlin) a...
In this thesis we are mainly concerned with the study of phylogenetic tree reconstruction algorithms...
International audienceRecently developed MinHash-based techniques were proven successful in quickly ...
International audienceWith the continuous growth of genome sequencing capabilities, phylogenetic tre...
Data Mining is a branch of knowledge discovery in the field of research and development. The biologi...
International audienceA popular approach in phylogenetics consists in estimating a matrix of evoluti...
We define a compression distance, based on a normal compressor to show it is an admissible distance....
Izgradnja filogenetskog stabla kreće izračunom matrice udaljenosti. Udaljenosti se računaju po Jukes...
Phylogenetics is one of the dominant data engineering research disciplines based on biological infor...
International audienceSeveral popular methods for inferring evolutionary trees (or for hierarchical ...
We have developed an alignment-free method that calculates phylogenetic distances using a maximum-li...
International audienceA phylogeny is an evolutionary tree tracing the shared history, including comm...
(1) A mathematical theory for computing the probabilities of various nucleotide configurations is de...
Phylogenetics is the study of the evolutionary relationships among different species through the ana...
Abstract.—Methods, such as the distance Wagner procedure, that construct phylogenetic trees by fitti...
These lecture notes are the result of a series of lectures given by Martin Vingron (MPI/FU Berlin) a...
In this thesis we are mainly concerned with the study of phylogenetic tree reconstruction algorithms...
International audienceRecently developed MinHash-based techniques were proven successful in quickly ...
International audienceWith the continuous growth of genome sequencing capabilities, phylogenetic tre...
Data Mining is a branch of knowledge discovery in the field of research and development. The biologi...