Thesis (Ph. D.)--Massachusetts Institute of Technology, Dept. of Aeronautics and Astronautics, 2008.This electronic version was submitted by the student author. The certified thesis is available in the Institute Archives and Special Collections."September 2008."Includes bibliographical references (leaves 153-164).Anisotropic, adaptive meshing for flows around complex, three-dimensional bodies remains a barrier to increased automation in computational fluid dynamics. Two specific advances are introduced in this thesis. First, a finite-volume discretization for tetrahedral cut-cells is developed that makes possible robust, anisotropic adaptation on complex bodies. Through grid refinement studies on inviscid flows, this cut-cell discretizatio...