International audienceNetwork controllability is a major challenge in network medicine. The problem is to rewire the molecular network for reprogramming the cell fate. The reprogramming action is considered as a control usually performed once. However, in some cases, a therapy has to follow a time-scheduled drug administration protocol. Furthermore, some diseases are induced by a sequence of mutations leading to a sequence of actions on molecules. In this paper, we extend the single control action method by investigating the sequential control of Boolean networks. We present a novel theoretical framework for formal study of control sequences, leading to algorithms resolving the PSPACE-hard problem of inferring minimal parsimonious control s...
This thesis explains what is cell reprogramming in Boolean networks, and what are several methods to...
This thesis explains what is cell reprogramming in Boolean networks, and what are several methods to...
Finding control strategies of cells is a challenging and important problem in the post-genomic era. ...
International audienceA major challenge in precision medicine consists in finding the appropriate ne...
Network controllability is a major challenge in network medicine. It consists in finding a way to re...
International audienceCellular reprogramming, a technique that opens huge opportunities in modern an...
We present an exact algorithm, based on techniques from the field of Model Checking, for finding con...
Control problem in a biological system is the problem of finding an interventional policy for changi...
Direct cell reprogramming has been garnering attention for its therapeutic potential for treating th...
Control problem in a biological system is the problem of finding an interventional policy for changi...
Best paper awardInternational audienceWe address the sequential reprogramming of gene regulatory net...
In recent years, Boolean-network-model-based approaches to dynamical analysis of complex biological ...
International audienceCellular reprogramming, a technique that opens huge opportunities in modern an...
Boolean networks allow a simplified representation of interactions. Here, the authors systematically...
Boolean networks are currently receiving considerable attention as a computational scheme for system...
This thesis explains what is cell reprogramming in Boolean networks, and what are several methods to...
This thesis explains what is cell reprogramming in Boolean networks, and what are several methods to...
Finding control strategies of cells is a challenging and important problem in the post-genomic era. ...
International audienceA major challenge in precision medicine consists in finding the appropriate ne...
Network controllability is a major challenge in network medicine. It consists in finding a way to re...
International audienceCellular reprogramming, a technique that opens huge opportunities in modern an...
We present an exact algorithm, based on techniques from the field of Model Checking, for finding con...
Control problem in a biological system is the problem of finding an interventional policy for changi...
Direct cell reprogramming has been garnering attention for its therapeutic potential for treating th...
Control problem in a biological system is the problem of finding an interventional policy for changi...
Best paper awardInternational audienceWe address the sequential reprogramming of gene regulatory net...
In recent years, Boolean-network-model-based approaches to dynamical analysis of complex biological ...
International audienceCellular reprogramming, a technique that opens huge opportunities in modern an...
Boolean networks allow a simplified representation of interactions. Here, the authors systematically...
Boolean networks are currently receiving considerable attention as a computational scheme for system...
This thesis explains what is cell reprogramming in Boolean networks, and what are several methods to...
This thesis explains what is cell reprogramming in Boolean networks, and what are several methods to...
Finding control strategies of cells is a challenging and important problem in the post-genomic era. ...