The complete article is available as a provisional PDF. The fully formatted PDF and HTML versions are in production.We present GENECODIS, a web-based tool that integrates different sources of information to search for annotations that frequently co-occur in a set of genes and rank them by their statistical significance. The analysis of concurrent annotations provides significant information for the biological interpretation of high-throughput experiments and may outperform the results of standard methods for the functional analysis of gene lists. GENECODIS is publicly available at http://genecodis.dacya.ucm.es/Peer reviewe
Computational approaches toward gene annotation are a formidable challenge, now that many genome seq...
Summary: Often, the most informative genes have to be selected from different gene sets and several ...
The all-redundant and structured terms are broken into 'independent' terms in a flat linear collecti...
This Provisional PDF corresponds to the article as it appeared upon acceptance. Copyedited and fully...
Since its first release in 2007, GeneCodis has become a valuable tool to functionally interpret resu...
Abstract Background Gene-list annotations are critical for researchers to explore the complex relati...
The emergence of high throughput data in genomic, proteomic and bioinformatics has increased the nec...
Recently, the numbers of prokaryotic genomes are completely sequenced and now more projects are ongo...
Motivation: The ontological analysis of the gene lists obtained from DNA microarray experiments cons...
Often, the most informative genes have to be selected from different gene setsand several computer g...
International audienceMOTIVATION: High-throughput technologies provide fundamental informations conc...
Background Gene function annotations, which are associations between a gene and a term of a control...
SUMMARY: Analysis and comparison of genomic and transcriptomic datasets have become standard procedu...
Background: The increasing volume and complexity of high-throughput genomic data make analysis and p...
Often, the most informative genes have to be selected from different gene sets and several computer ...
Computational approaches toward gene annotation are a formidable challenge, now that many genome seq...
Summary: Often, the most informative genes have to be selected from different gene sets and several ...
The all-redundant and structured terms are broken into 'independent' terms in a flat linear collecti...
This Provisional PDF corresponds to the article as it appeared upon acceptance. Copyedited and fully...
Since its first release in 2007, GeneCodis has become a valuable tool to functionally interpret resu...
Abstract Background Gene-list annotations are critical for researchers to explore the complex relati...
The emergence of high throughput data in genomic, proteomic and bioinformatics has increased the nec...
Recently, the numbers of prokaryotic genomes are completely sequenced and now more projects are ongo...
Motivation: The ontological analysis of the gene lists obtained from DNA microarray experiments cons...
Often, the most informative genes have to be selected from different gene setsand several computer g...
International audienceMOTIVATION: High-throughput technologies provide fundamental informations conc...
Background Gene function annotations, which are associations between a gene and a term of a control...
SUMMARY: Analysis and comparison of genomic and transcriptomic datasets have become standard procedu...
Background: The increasing volume and complexity of high-throughput genomic data make analysis and p...
Often, the most informative genes have to be selected from different gene sets and several computer ...
Computational approaches toward gene annotation are a formidable challenge, now that many genome seq...
Summary: Often, the most informative genes have to be selected from different gene sets and several ...
The all-redundant and structured terms are broken into 'independent' terms in a flat linear collecti...