We present an approach that simultaneously infers model parameters while statistically verifying properties of interest to chemical reaction networks, which we observe through data and we model as parametrised continuous-time Markov Chains. The new approach simultaneously integrates learning models from data, done by likelihood-free Bayesian inference, specifically Approximate Bayesian Computation, with formal verification over models, done by statistically model checking properties expressed as logical specifications (in CSL). The approach generates a probability (or credibility calculation) on whether a given chemical reaction network satisfies a property of interest
Stochastic methods for simulating biochemical reaction networks often provide a more realistic descr...
Living systems are inherently stochastic and operate in a noisy environment: in single cells, react...
We consider the problem of verifying stochastic models of biochemical networks against behavioral pr...
Thesis: Ph. D., Massachusetts Institute of Technology, Department of Mechanical Engineering, 2016.Ca...
The development of chemical reaction models aids understanding and prediction in areas ranging from ...
The development of chemical reaction models aids understanding and prediction in areas ranging from ...
The development of chemical reaction models aids understanding and prediction in areas ranging from ...
The development of chemical reaction models aids understanding and prediction in areas ranging from ...
Recent work on molecular programming has explored new possibilities for com-putational abstractions ...
The development of chemical reaction models aids understanding and prediction in areas ranging from ...
The development of chemical reaction models aids understanding and prediction in areas ranging from ...
International audienceDesigning probabilistic reaction models and determining their stochastic kinet...
The stochastic dynamics of biochemical reaction networks can be modeled using a number of succinct f...
The stochastic dynamics of biochemical reaction networks can be modeled using a number of succinct f...
AbstractThe stochastic dynamics of biochemical reaction networks can be modeled using a number of su...
Stochastic methods for simulating biochemical reaction networks often provide a more realistic descr...
Living systems are inherently stochastic and operate in a noisy environment: in single cells, react...
We consider the problem of verifying stochastic models of biochemical networks against behavioral pr...
Thesis: Ph. D., Massachusetts Institute of Technology, Department of Mechanical Engineering, 2016.Ca...
The development of chemical reaction models aids understanding and prediction in areas ranging from ...
The development of chemical reaction models aids understanding and prediction in areas ranging from ...
The development of chemical reaction models aids understanding and prediction in areas ranging from ...
The development of chemical reaction models aids understanding and prediction in areas ranging from ...
Recent work on molecular programming has explored new possibilities for com-putational abstractions ...
The development of chemical reaction models aids understanding and prediction in areas ranging from ...
The development of chemical reaction models aids understanding and prediction in areas ranging from ...
International audienceDesigning probabilistic reaction models and determining their stochastic kinet...
The stochastic dynamics of biochemical reaction networks can be modeled using a number of succinct f...
The stochastic dynamics of biochemical reaction networks can be modeled using a number of succinct f...
AbstractThe stochastic dynamics of biochemical reaction networks can be modeled using a number of su...
Stochastic methods for simulating biochemical reaction networks often provide a more realistic descr...
Living systems are inherently stochastic and operate in a noisy environment: in single cells, react...
We consider the problem of verifying stochastic models of biochemical networks against behavioral pr...