Comparative analysis of metazoan chromatin organization

Global Chromatin Domain Organization of the Drosophila Genome

Elzo De Wit¤a
Ulrich Braunschweig
Harmen J. Bussemaker
Bas Van Steensel

January 2008

In eukaryotes, neighboring genes can be packaged together in specific chromatin structures that ensu...

COMBINATORIAL REGULATION BY ENZYMES THAT MODULATE THE CHROMATIN LANDSCAPE AND GENE EXPRESSION

Runge, John

January 2018

The eukaryotic genome is stored in the nucleus as chromatin, a dynamic structure of DNA and histone ...

Evolution of Chromatin Modification Machinery

On, Tuan

January 2011

This thesis explores chromatin modification (CM) as a biological system and uses known CM factors in...

Comparative analysis of metazoan chromatin organization

Ho, Joshua W. K.
Jung, Youngsook L.
Liu, Tao
Alver, Burak H.
Lee, Soohyun
Ikegami, Kohta
Sohn, Kyung-Ah
Minoda, Aki
Tolstorukov, Michael Y.
Appert, Alex
Parker, Stephen C. J.
Gu, Tingting
Kundaje, Anshul
Riddle, Nicole C.
Bishop, Eric
Egelhofer, Thea A.
Hu, Sheng'en Shawn
Alekseyenko, Artyom A.
Rechtsteiner, Andreas
Asker, Dalal
Belsky, Jason A.
Bowman, Sarah K.
Chen, Q. Brent
Chen, Ron A.-J.
Day, Daniel S.
Dong, Yan
Dose, Andrea C.
Duan, Xikun
Epstein, Charles B.
Ercan, Sevinc
Feingold, Elise A.
Ferrari, Francesco

January 2014

Genome function is dynamically regulated in part by chromatin, which consists of the histones, non-h...

Characterization of chromatin architecture and the mechanism of dosage compensation in Drosophila melanogaster

Bishop, Eric Paul

January 2012

Thesis (Ph.D.)--Boston UniversityPLEASE NOTE: Boston University Libraries did not receive an Authori...

Broad chromosomal domains of histone modification patterns in C. elegans

Liu, T.
Rechtsteiner, A.
Egelhofer, T. A.
Vielle, A.
Latorre, I.
Cheung, M.-S.
Ercan, S.
Ikegami, K.
Jensen, M.
Kolasinska-Zwierz, P.
Rosenbaum, H.
Shin, H.
Taing, S.
Takasaki, T.
Iniguez, A. L.
Desai, A.
Dernburg, A. F.
Kimura, H.
Lieb, J. D.
Ahringer, J.
Strome, S.
Liu, X. S.

January 2011

Chromatin immunoprecipitation identifies specific interactions between genomic DNA and proteins, adv...

Comprehensive analysis of the chromatin landscape in Drosophila melanogaster

Ernst, Jason
Kellis, Manolis

December 2010

Chromatin is composed of DNA and a variety of modified histones and non-histone proteins, which have...

Systematic Protein Location Mapping Reveals Five Principal Chromatin Types in Drosophila Cells

Filion, Guillaume J.
van Bemmel, Joke G.
Braunschweig, Ulrich
Talhout, Wendy
Kind, Jop
Ward, Lucas D.
Brugman, Wim
de Castro, Inês J.
Kerkhoven, Ron M.
Bussemaker, Harmen J.
van Steensel, Bas

October 2010

SummaryChromatin is important for the regulation of transcription and other functions, yet the diver...

Comparative genomics of transcription factors and chromatin proteins in parasitic protists and other eukaryotes

Iyer, Lakshminarayan M.
Anantharaman, Vivek
Wolf, Maxim Y.
Aravind, L.

January 2008

AbstractComparative genomics of parasitic protists and their free-living relatives are profoundly im...

A phylogenetic and proteomic reconstruction of eukaryotic chromatin evolution

Grau-Bové, Xavier
Navarrete, Cristina
Chiva, Cristina
Pribasnig, Thomas
Antó, Meritxell
Torruella, Guifré
Galindo, Luis
Lang, B. Franz
Moreira, David
López-García, Purificación
Ruiz-Trillo, Iñaki
Schleper, Christa
Sabidó, Eduard
Sebé-Pedrós, Arnau

September 2022

Histones and associated chromatin proteins have essential functions in eukaryotic genome organizatio...

Chromatin in Multicolor

Schübeler, Dirk

October 2010

Chromatin consists of DNA and a large number of associated proteins. Filion et al. (2010) provide a ...

Comprehensive analysis of the chromatin landscape in Drosophila melanogaster.

Kharchenko, Peter V
Alekseyenko, Artyom A
Schwartz, Yuri B
Minoda, Aki
Riddle, Nicole C
Ernst, Jason
Sabo, Peter J
Larschan, Erica
Gorchakov, Andrey A
Gu, Tingting
Linder-Basso, Daniela
Plachetka, Annette
Shanower, Gregory
Tolstorukov, Michael Y
Luquette, Lovelace J
Xi, Ruibin
Jung, Youngsook L
Park, Richard W
Bishop, Eric P
Canfield, Theresa K
Sandstrom, Richard
Thurman, Robert E
MacAlpine, David M
Stamatoyannopoulos, John A
Kellis, Manolis
Elgin, Sarah CR
Kuroda, Mitzi I
Pirrotta, Vincenzo
Karpen, Gary H
Park, Peter J

March 2011

Chromatin is composed of DNA and a variety of modified histones and non-histone proteins, which have...

Extensive conservation of ancient microsynteny across metazoans due to cis-regulatory constraints

Irimia, Manuel
Tena, Juan J.
Fernández-Miñán, Ana
Maeso, Ignacio
Bogdanovic, Ozren
Calle-Mustienes, Elisa de la
Gómez-Skarmeta, José Luis
Fraser, Hunter B.

January 2012

This article is distributed exclusively by Cold Spring Harbor Laboratory Press for the first six mon...

Toward comprehensive characterization of chromatin state

Durham, Timothy

January 2019

Thesis (Ph.D.)--University of Washington, 2019One of the principal questions in biology is how the g...

Expanding the landscape of chromatin modification (CM)-related functional domains and genes in human.

Shuye Pu
Andrei L Turinsky
James Vlasblom
Tuan On
Xuejian Xiong
Andrew Emili
Zhaolei Zhang
Jack Greenblatt
John Parkinson
Shoshana J Wodak

November 2010

Chromatin modification (CM) plays a key role in regulating transcription, DNA replication, repair an...

Global Chromatin Domain Organization of the Drosophila Genome

Elzo De Wit¤a
Ulrich Braunschweig
Harmen J. Bussemaker
Bas Van Steensel

January 2008

In eukaryotes, neighboring genes can be packaged together in specific chromatin structures that ensu...

COMBINATORIAL REGULATION BY ENZYMES THAT MODULATE THE CHROMATIN LANDSCAPE AND GENE EXPRESSION

Runge, John

January 2018

The eukaryotic genome is stored in the nucleus as chromatin, a dynamic structure of DNA and histone ...

Evolution of Chromatin Modification Machinery

On, Tuan

January 2011

This thesis explores chromatin modification (CM) as a biological system and uses known CM factors in...

Comparative analysis of metazoan chromatin organization

Ho, Joshua W. K.
Jung, Youngsook L.
Liu, Tao
Alver, Burak H.
Lee, Soohyun
Ikegami, Kohta
Sohn, Kyung-Ah
Minoda, Aki
Tolstorukov, Michael Y.
Appert, Alex
Parker, Stephen C. J.
Gu, Tingting
Kundaje, Anshul
Riddle, Nicole C.
Bishop, Eric
Egelhofer, Thea A.
Hu, Sheng'en Shawn
Alekseyenko, Artyom A.
Rechtsteiner, Andreas
Asker, Dalal
Belsky, Jason A.
Bowman, Sarah K.
Chen, Q. Brent
Chen, Ron A.-J.
Day, Daniel S.
Dong, Yan
Dose, Andrea C.
Duan, Xikun
Epstein, Charles B.
Ercan, Sevinc
Feingold, Elise A.
Ferrari, Francesco

January 2014

Genome function is dynamically regulated in part by chromatin, which consists of the histones, non-h...

Characterization of chromatin architecture and the mechanism of dosage compensation in Drosophila melanogaster

Bishop, Eric Paul

January 2012

Thesis (Ph.D.)--Boston UniversityPLEASE NOTE: Boston University Libraries did not receive an Authori...

Broad chromosomal domains of histone modification patterns in C. elegans

Liu, T.
Rechtsteiner, A.
Egelhofer, T. A.
Vielle, A.
Latorre, I.
Cheung, M.-S.
Ercan, S.
Ikegami, K.
Jensen, M.
Kolasinska-Zwierz, P.
Rosenbaum, H.
Shin, H.
Taing, S.
Takasaki, T.
Iniguez, A. L.
Desai, A.
Dernburg, A. F.
Kimura, H.
Lieb, J. D.
Ahringer, J.
Strome, S.
Liu, X. S.

January 2011

Chromatin immunoprecipitation identifies specific interactions between genomic DNA and proteins, adv...

Comprehensive analysis of the chromatin landscape in Drosophila melanogaster

Ernst, Jason
Kellis, Manolis

December 2010

Chromatin is composed of DNA and a variety of modified histones and non-histone proteins, which have...

Systematic Protein Location Mapping Reveals Five Principal Chromatin Types in Drosophila Cells

Filion, Guillaume J.
van Bemmel, Joke G.
Braunschweig, Ulrich
Talhout, Wendy
Kind, Jop
Ward, Lucas D.
Brugman, Wim
de Castro, Inês J.
Kerkhoven, Ron M.
Bussemaker, Harmen J.
van Steensel, Bas

October 2010

SummaryChromatin is important for the regulation of transcription and other functions, yet the diver...

Comparative genomics of transcription factors and chromatin proteins in parasitic protists and other eukaryotes

Iyer, Lakshminarayan M.
Anantharaman, Vivek
Wolf, Maxim Y.
Aravind, L.

January 2008

AbstractComparative genomics of parasitic protists and their free-living relatives are profoundly im...

A phylogenetic and proteomic reconstruction of eukaryotic chromatin evolution

Grau-Bové, Xavier
Navarrete, Cristina
Chiva, Cristina
Pribasnig, Thomas
Antó, Meritxell
Torruella, Guifré
Galindo, Luis
Lang, B. Franz
Moreira, David
López-García, Purificación
Ruiz-Trillo, Iñaki
Schleper, Christa
Sabidó, Eduard
Sebé-Pedrós, Arnau

September 2022

Histones and associated chromatin proteins have essential functions in eukaryotic genome organizatio...

Chromatin in Multicolor

Schübeler, Dirk

October 2010

Chromatin consists of DNA and a large number of associated proteins. Filion et al. (2010) provide a ...

Comprehensive analysis of the chromatin landscape in Drosophila melanogaster.

Kharchenko, Peter V
Alekseyenko, Artyom A
Schwartz, Yuri B
Minoda, Aki
Riddle, Nicole C
Ernst, Jason
Sabo, Peter J
Larschan, Erica
Gorchakov, Andrey A
Gu, Tingting
Linder-Basso, Daniela
Plachetka, Annette
Shanower, Gregory
Tolstorukov, Michael Y
Luquette, Lovelace J
Xi, Ruibin
Jung, Youngsook L
Park, Richard W
Bishop, Eric P
Canfield, Theresa K
Sandstrom, Richard
Thurman, Robert E
MacAlpine, David M
Stamatoyannopoulos, John A
Kellis, Manolis
Elgin, Sarah CR
Kuroda, Mitzi I
Pirrotta, Vincenzo
Karpen, Gary H
Park, Peter J

March 2011

Chromatin is composed of DNA and a variety of modified histones and non-histone proteins, which have...

Extensive conservation of ancient microsynteny across metazoans due to cis-regulatory constraints

Irimia, Manuel
Tena, Juan J.
Fernández-Miñán, Ana
Maeso, Ignacio
Bogdanovic, Ozren
Calle-Mustienes, Elisa de la
Gómez-Skarmeta, José Luis
Fraser, Hunter B.

January 2012

This article is distributed exclusively by Cold Spring Harbor Laboratory Press for the first six mon...

Toward comprehensive characterization of chromatin state

Durham, Timothy

January 2019

Thesis (Ph.D.)--University of Washington, 2019One of the principal questions in biology is how the g...

Expanding the landscape of chromatin modification (CM)-related functional domains and genes in human.

Shuye Pu
Andrei L Turinsky
James Vlasblom
Tuan On
Xuejian Xiong
Andrew Emili
Zhaolei Zhang
Jack Greenblatt
John Parkinson
Shoshana J Wodak

November 2010

Chromatin modification (CM) plays a key role in regulating transcription, DNA replication, repair an...

Global Chromatin Domain Organization of the Drosophila Genome

Elzo De Wit¤a
Ulrich Braunschweig
Harmen J. Bussemaker
Bas Van Steensel

January 2008

In eukaryotes, neighboring genes can be packaged together in specific chromatin structures that ensu...

COMBINATORIAL REGULATION BY ENZYMES THAT MODULATE THE CHROMATIN LANDSCAPE AND GENE EXPRESSION

Runge, John

January 2018

The eukaryotic genome is stored in the nucleus as chromatin, a dynamic structure of DNA and histone ...

Evolution of Chromatin Modification Machinery

On, Tuan

January 2011

This thesis explores chromatin modification (CM) as a biological system and uses known CM factors in...

Comparative analysis of metazoan chromatin organization

Abstract

Extracted data

Comparative analysis of metazoan chromatin organization

Abstract

Extracted data

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