Treballs Finals de Grau de Física, Facultat de Física, Universitat de Barcelona, Curs: 2020, Tutors: Jaime Aspas Cáceres, Fèlix Ritort FarranDifferent studies have shown how to approach the folding process of the RNA, with optical tweezers. On this basis, we've present a simple case of the simulation of a single RNA hairpin pulling experiment. During this work, the experimental device simulated is described and modeled, where also its elastic properties have been considered, as they are an important part of the study. Subsequently, information is extracted from the data and the results obtained on the simulation, related with the thermodynamics of kinetics the unfolding/folding of RNA molecule. The simulated model reproduces qualitatively ...
RNA folding is a kinetic process governed by the competition of a large number of structures stabili...
The folding of a small RNA tetraloop hairpin is studied based on intensive molecular dynamics simula...
The folding energy landscapes of RNA and proteins have been studied using experiments and molecular ...
AbstractRecent single-molecule pulling experiments have shown how it is possible to manipulate RNA m...
AbstractBy exerting mechanical force, it is possible to unfold/refold RNA molecules one at a time. I...
AbstractNanomanipulation of individual RNA molecules, using laser optical tweezers, has made it poss...
AbstractMechanical unfolding of RNA structures, ranging from hairpins to ribozymes, using laser opti...
AbstractExperimental variables of optical tweezers instrumentation that affect RNA folding/unfolding...
AbstractUsing polymer elastic theory and known RNA free energies, we construct a Monte Carlo algorit...
Understanding the folding mechanism of RNAs is critical for studying their structure-function relati...
ABSTRACT Nanomanipulation of individual RNA molecules, using laser optical tweezers, has made it pos...
ABSTRACT Mechanical unfolding of RNA structures, ranging from hairpins to ribozymes, using laser opt...
AbstractBased on an ensemble of kinetically accessible conformations, we propose a new analytical mo...
AbstractWe develop a continue time Monte Carlo algorithm to simulate single RNAs unfolded by a time-...
AbstractMechanical unfolding and refolding of single RNA molecules have previously been observed in ...
RNA folding is a kinetic process governed by the competition of a large number of structures stabili...
The folding of a small RNA tetraloop hairpin is studied based on intensive molecular dynamics simula...
The folding energy landscapes of RNA and proteins have been studied using experiments and molecular ...
AbstractRecent single-molecule pulling experiments have shown how it is possible to manipulate RNA m...
AbstractBy exerting mechanical force, it is possible to unfold/refold RNA molecules one at a time. I...
AbstractNanomanipulation of individual RNA molecules, using laser optical tweezers, has made it poss...
AbstractMechanical unfolding of RNA structures, ranging from hairpins to ribozymes, using laser opti...
AbstractExperimental variables of optical tweezers instrumentation that affect RNA folding/unfolding...
AbstractUsing polymer elastic theory and known RNA free energies, we construct a Monte Carlo algorit...
Understanding the folding mechanism of RNAs is critical for studying their structure-function relati...
ABSTRACT Nanomanipulation of individual RNA molecules, using laser optical tweezers, has made it pos...
ABSTRACT Mechanical unfolding of RNA structures, ranging from hairpins to ribozymes, using laser opt...
AbstractBased on an ensemble of kinetically accessible conformations, we propose a new analytical mo...
AbstractWe develop a continue time Monte Carlo algorithm to simulate single RNAs unfolded by a time-...
AbstractMechanical unfolding and refolding of single RNA molecules have previously been observed in ...
RNA folding is a kinetic process governed by the competition of a large number of structures stabili...
The folding of a small RNA tetraloop hairpin is studied based on intensive molecular dynamics simula...
The folding energy landscapes of RNA and proteins have been studied using experiments and molecular ...