The major histocompatibility (MHC) class II molecules present peptides to the T cell receptor on CD4+ lymphocytes. The diversity of the epitopes presented depends critically on the processing of the ingested antigens, and the endocytic pathway constitutes a set of increasingly protease-rich/acidic compartments to facilitate the progressive digestion of antigens. Targeting of newly synthesized MHC class II molecules to more acidic endosomal compartments depends on association with the invariant chain (Ii) molecule. Ii is synthesized in excess of class II and is also present in a MHC class II-free form. It is therefore possible that Ii may have other functions in post-endoplasmatic reticulum compartments. In this study we demonstrate the inte...