Add to ORKGThe definition of a phase shift of triplet periodicity (TP) is introduced. The mathematical algorithm for detection of a phase shift of TP in nucleotide se-quences has been developed. The gene sequences from the Kegg-46 data bank were have been analyzed to search for genes with TP phase shifts. The presence of a phase shift of TP for 318329 genes (~10 % from the total number of genes in the Kegg-46 data bank) has been demonstrated. We show that TP phase shifts are determined by the shifts of a reading frame (RF) in genes. The connection between phase shifts of TP and RF shifts in genes is discussed
Periodicity in nucleotide sequences arises from regular repeating patterns that may reflect importan...
Periodicity in nucleotide sequences arises from regular repeating patterns which may reflect import-...
Abstract Background Sequence context is an important aspect of base mutagenesis, and three-base peri...
The definition of a phase shift of triplet periodicity (TP) is introduced. The mathematical algorith...
We introduce a novel approach for the detection of possible mutations leading to a reading frame (RF...
AbstractThe concept of the phase shift of triplet periodicity (TP) was used for searching potential ...
The triplet periodicity (TP) is a distinguished property of protein coding sequences. There are com...
The Monte Carlo method is used for search of mutations in genes arising by reading frame (RF) shifts...
Abstract Background The protein-coding regions (coding exons) of a DNA sequence exhibit a triplet pe...
Triplet periodicity (TP) is distinguishing property of protein coding sequences of both prokaryote ...
An earlier reported method for revealing latent periodicity of the nucleotide sequences has been con...
International audienceRecently, shifted periodicities 1 module 3 and 2 module 3 have been identified...
The statistical study of different populations of genes, with principal component analyses (PCA) and...
Abstract. Prokaryotic sequences are responsible for more than just protein coding. There are two 10-...
2014-2015 > Academic research: refereed > Publication in refereed journalVersion of RecordPublishe
Periodicity in nucleotide sequences arises from regular repeating patterns that may reflect importan...
Periodicity in nucleotide sequences arises from regular repeating patterns which may reflect import-...
Abstract Background Sequence context is an important aspect of base mutagenesis, and three-base peri...
The definition of a phase shift of triplet periodicity (TP) is introduced. The mathematical algorith...
We introduce a novel approach for the detection of possible mutations leading to a reading frame (RF...
AbstractThe concept of the phase shift of triplet periodicity (TP) was used for searching potential ...
The triplet periodicity (TP) is a distinguished property of protein coding sequences. There are com...
The Monte Carlo method is used for search of mutations in genes arising by reading frame (RF) shifts...
Abstract Background The protein-coding regions (coding exons) of a DNA sequence exhibit a triplet pe...
Triplet periodicity (TP) is distinguishing property of protein coding sequences of both prokaryote ...
An earlier reported method for revealing latent periodicity of the nucleotide sequences has been con...
International audienceRecently, shifted periodicities 1 module 3 and 2 module 3 have been identified...
The statistical study of different populations of genes, with principal component analyses (PCA) and...
Abstract. Prokaryotic sequences are responsible for more than just protein coding. There are two 10-...
2014-2015 > Academic research: refereed > Publication in refereed journalVersion of RecordPublishe
Periodicity in nucleotide sequences arises from regular repeating patterns that may reflect importan...
Periodicity in nucleotide sequences arises from regular repeating patterns which may reflect import-...
Abstract Background Sequence context is an important aspect of base mutagenesis, and three-base peri...