The specificity-determining residue database (SDR database) presents residue positions where mutations are predicted to have changed protein function in large protein families. Because the database pre-calculates predictions on existing protein sequence alignments, users can quickly find the predictions by selecting the appropriate protein family or searching by protein sequence. Predictions can be used to guide mutagenesis or to gain a better understanding of specificity changes in a protein family. The database is available on the web at http://paradox.harvard.edu/sdr.Chemistry and Chemical Biolog
Specificity-determining sites (SDS) are the key positions of a protein family that show a specific c...
Background: Amino acids responsible for structure, core function or specificity may be inferred from...
AbstractThe rapid increase in the amount of protein sequence data has created a need for automated i...
Certain amino acid residues in a protein, when mutated, change the protein's function. We present an...
Motivation: Within a homologous protein family, proteins may be grouped into subtypes that share spe...
<div><p>Determining enzyme functions is essential for a thorough understanding of cellular processes...
Determining enzyme functions is essential for a thorough understanding of cellular processes. Althou...
Motivation: The prediction of ligand-binding residues or catalytically active residues of a protein ...
Certain amino acid residues in a protein, when mutated, change the protein’s function. We present an...
Certain amino acid residues in a protein, when mutated, change the protein’s function. We present an...
Background The identification of functionally important residue positions is an important task of co...
MOTIVATION: Identification of residues that account for protein function specificity is crucial, not...
Since the advent of large-scale genomic sequencing, and the consequent availability of large numbers...
A common goal in molecular biology is to identify functional amino acid residues within a protein. T...
Enzymes are highly efficient bio-catalysts interesting for industries and medicine. Therefore, a goa...
Specificity-determining sites (SDS) are the key positions of a protein family that show a specific c...
Background: Amino acids responsible for structure, core function or specificity may be inferred from...
AbstractThe rapid increase in the amount of protein sequence data has created a need for automated i...
Certain amino acid residues in a protein, when mutated, change the protein's function. We present an...
Motivation: Within a homologous protein family, proteins may be grouped into subtypes that share spe...
<div><p>Determining enzyme functions is essential for a thorough understanding of cellular processes...
Determining enzyme functions is essential for a thorough understanding of cellular processes. Althou...
Motivation: The prediction of ligand-binding residues or catalytically active residues of a protein ...
Certain amino acid residues in a protein, when mutated, change the protein’s function. We present an...
Certain amino acid residues in a protein, when mutated, change the protein’s function. We present an...
Background The identification of functionally important residue positions is an important task of co...
MOTIVATION: Identification of residues that account for protein function specificity is crucial, not...
Since the advent of large-scale genomic sequencing, and the consequent availability of large numbers...
A common goal in molecular biology is to identify functional amino acid residues within a protein. T...
Enzymes are highly efficient bio-catalysts interesting for industries and medicine. Therefore, a goa...
Specificity-determining sites (SDS) are the key positions of a protein family that show a specific c...
Background: Amino acids responsible for structure, core function or specificity may be inferred from...
AbstractThe rapid increase in the amount of protein sequence data has created a need for automated i...