Thermostats are dynamical equations used to model thermodynamic variables such as temperature in molecular simulations. For computationally intensive problems such as the simulation of biomolecules, we propose to average over fast momentum degrees of freedom and construct thermostat equations in configuration space. The equations of motion are analogous to Smoluchowski dynamics in the method of stochastic differential equations. Thus we pose and solve in part the Kramers problem for the deterministic thermostat method
We discuss a dynamical technique for sampling the canonical measure in molecular dynamics. We presen...
Dynamical equations describing physical systems in contact with a thermal bath are commonly extended...
We show that Nos'e's thermostat can be given a mechanical formulation (with Hamiltonian ha...
Abstract Thermostats are dynamical equations used to model thermodynamic variables such as temperatu...
Thermostats are dynamical equations used to model thermodynamic variables such as temperature and pr...
A broad array of canonical sampling methods are available for molecular simulation based on stochast...
A broad array of canonical sampling methods are available for molecular simulation based on stochast...
The path integral molecular dynamics (PIMD) method provides a convenient way to compute the quantum ...
Abstract. A broad array of canonical sampling methods are available for molecular simulation based o...
Recently, we have shown how a colored-noise Langevin equation can be used in the context of molecula...
In this paper, we discuss advanced thermostatting techniques for sampling molecular systems in the c...
A thermostat of the Nose-Hoover type, based on relative velocities and a local definition of the tem...
This book describes the mathematical underpinnings of algorithms used for molecular dynamics simulat...
In this paper we discuss thermostatting using stochastic methods for molecular simulations where con...
In this paper we discuss thermostatting using stochastic methods for molecular simulations where con...
We discuss a dynamical technique for sampling the canonical measure in molecular dynamics. We presen...
Dynamical equations describing physical systems in contact with a thermal bath are commonly extended...
We show that Nos'e's thermostat can be given a mechanical formulation (with Hamiltonian ha...
Abstract Thermostats are dynamical equations used to model thermodynamic variables such as temperatu...
Thermostats are dynamical equations used to model thermodynamic variables such as temperature and pr...
A broad array of canonical sampling methods are available for molecular simulation based on stochast...
A broad array of canonical sampling methods are available for molecular simulation based on stochast...
The path integral molecular dynamics (PIMD) method provides a convenient way to compute the quantum ...
Abstract. A broad array of canonical sampling methods are available for molecular simulation based o...
Recently, we have shown how a colored-noise Langevin equation can be used in the context of molecula...
In this paper, we discuss advanced thermostatting techniques for sampling molecular systems in the c...
A thermostat of the Nose-Hoover type, based on relative velocities and a local definition of the tem...
This book describes the mathematical underpinnings of algorithms used for molecular dynamics simulat...
In this paper we discuss thermostatting using stochastic methods for molecular simulations where con...
In this paper we discuss thermostatting using stochastic methods for molecular simulations where con...
We discuss a dynamical technique for sampling the canonical measure in molecular dynamics. We presen...
Dynamical equations describing physical systems in contact with a thermal bath are commonly extended...
We show that Nos'e's thermostat can be given a mechanical formulation (with Hamiltonian ha...