The Observed Probability Distribution Function, Power Spectrum and Correlation Function of the Transmitted Flux in the Lyman-$\alpha$ Forest

A sample of eight quasars observed at high resolution and signal-to-noise is used to determine the probability distribution function (PDF), the power spectrum, and the correlation function of the transmitted flux in the \lya forest, in three redshift bins centered at z=2.41, 3.00, and 3.89. All the results are presented in tabular form, with full error covariance matrices to allow for comparisons with any numerical simulations and with other data sets. The observations are compared with a numerical simulation of the \lya forest of a Lambda-CDM model with Omega=0.4, known to agree with other large-scale structure observational constraints. There is excellent agreement for the PDF, if the mean transmitted flux is adjusted to match the observations. A small difference between the observed and predicted PDF is found at high fluxes and low redshift, which may be due to the uncertain effects of fitting the spectral continuum. Using the numerical simulation, we show how the flux power spectrum can be used to recover the initial power spectrum of density fluctuations. From our sample of eight quasars, we measure the amplitude of the mass power spectrum to correspond to a linear variance per unit ln(k) of the power spectrum near the same k to be $n_p=-2.55\pm0.10$ (statistical error bars). The results are statistically consistent with Croft et. al. (1999), although our value for the rms fluctuation is lower by a factor 0.75. For the Lambda-CDM model we use, the implied primordial slope is $n=0.93\pm0.10$, and the normalization is $\sigma_8=0.68+1.16(0.95-n)\pm0.04$