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Not AvailableBiodiversity is central to the study of biology and research on the effects of human activities on biodiversity is becoming increasingly important as extinction levels increase. Many factors are increasing extinction levels, and continuous nitrogen application may be one of the reason driving terrestrial extinctions. Understanding the response of arable weed community assembly to fertilization is important for designing better weed management strategies in tropical rice–rice systems and also for changes in weed biodiversity. The cumulative effects of various fertilization treatments on weed species composition and diversity along with rice growth and yield were investigated in a long-term fertilizer experiment established 43 years ago in CRRI, Cuttack, India. A total of 20 weed species were observed in the study, out of which 6 species (i.e., Cyperus difformis, Cyperus tenuspica, Fimbristylis miliacea, Echinochloa colona, Oldenlandia corymbosa, Lindernia anagallis) occurred in all treatments and remaining species occurred only in some of the treatments. Sedges were dominant in all the treatments followed by broad-leaves and grasses, high relative density of weeds was observed in control and FYM treated plots, whereas, low weed density was observed in N, NPK and NPK + FYM treatments. The indices of species diversity (species richness, Shannon–Wiener, Pielou and Simpson indices) showed linear relationships with rice yield. The balanced fertilization was more efficient at inhibiting the potential growth of weeds because of the increased growth of rice leading to competition for nutrients. Principal component analysis showed that changes in the weed community composition were due to application of P and FYM. Balance fertilization showed a positive effect on rice yield and negatively affect weeds density, although the effect is negative but balance fertilization is not resulted in species elimination or hampered biodiversity.ICA