Add to ORKGWe describe a model for the sequence evolution of a processed pseudogene and its paralog from a common protein-coding ancestor. The model accounts for substitutions, insertions and deletions, and combines nucleotide- and codon-level mutation models
Many naturally occurring biological molecules, such as nucleic acids or proteins, are evolutionary r...
The model of insertions and deletions in biological sequences, first formulated by Thorne, Kishino, ...
Over the last decade, methods have been developed for the reconstruction of gene trees that take int...
We describe a model for the sequence evolution of a processed pseudogene and its paralog from a comm...
International audienceModern methods to detecting adaptive evolution from interspecific protein-codi...
Comparison of sequences that have descended from a common ancestor based on an explicit stochastic m...
Motivation: The topic of this paper is the estimation of alignments and mutation rates based on stoc...
For several decades, sequence alignment has been a widely used tool in bioinformatics. For instance,...
BackgroundFor the purposes of finding and aligning noncoding RNA gene- and cis-regulatory elements i...
Stoye J, Evers D, Meyer F. Generating benchmarks for multiple sequence alignments and phylogenetic r...
Background. For the purposes of finding and aligning noncoding RNA gene- and cis-regulatory elements...
One of the primary forces driving genome evolution is retrotranscription. In addition to creating ne...
A method is described for performing global alignment of noncoding DNA sequences based on an evoluti...
International audiencePhylogenetic codon models are routinely used to characterize selective regimes...
International audienceThis article proposes a novel approach to statistical alignment of nucleotide ...
Many naturally occurring biological molecules, such as nucleic acids or proteins, are evolutionary r...
The model of insertions and deletions in biological sequences, first formulated by Thorne, Kishino, ...
Over the last decade, methods have been developed for the reconstruction of gene trees that take int...
We describe a model for the sequence evolution of a processed pseudogene and its paralog from a comm...
International audienceModern methods to detecting adaptive evolution from interspecific protein-codi...
Comparison of sequences that have descended from a common ancestor based on an explicit stochastic m...
Motivation: The topic of this paper is the estimation of alignments and mutation rates based on stoc...
For several decades, sequence alignment has been a widely used tool in bioinformatics. For instance,...
BackgroundFor the purposes of finding and aligning noncoding RNA gene- and cis-regulatory elements i...
Stoye J, Evers D, Meyer F. Generating benchmarks for multiple sequence alignments and phylogenetic r...
Background. For the purposes of finding and aligning noncoding RNA gene- and cis-regulatory elements...
One of the primary forces driving genome evolution is retrotranscription. In addition to creating ne...
A method is described for performing global alignment of noncoding DNA sequences based on an evoluti...
International audiencePhylogenetic codon models are routinely used to characterize selective regimes...
International audienceThis article proposes a novel approach to statistical alignment of nucleotide ...
Many naturally occurring biological molecules, such as nucleic acids or proteins, are evolutionary r...
The model of insertions and deletions in biological sequences, first formulated by Thorne, Kishino, ...
Over the last decade, methods have been developed for the reconstruction of gene trees that take int...