. We describe results obtained from a new implementation of Hockney's Particle-Particle Particle-Mesh (PPPM) method for simulating many particle systems interacting via long-range Coulombic potentials. Rather than taking the usual approach, solving Poisson's equation by means of a Fourier transformation, we used an iterative Poisson solver. In a molecular dynamics (MD) simulation the solution from the previous time-step is a very good starting point for the next solution. This reduces the number of iterations per time-step to acceptable values. The iterative scheme has a complexity O(N ), and in contrast with the Fourier transform based approach, it is easily implemented on a parallel architecture with a minimum of communication o...
The Monte Carlo-Metropolis (MM) and Molecular Dynamics (MD) techniques are among the most popular ap...
For the purpose of molecular dynamics simulations of large biopolymers we have developed a new metho...
The simulation of classical particle systems by means of molecular dynamics techniques requires the ...
Computer simulations of complex particle systems play an increasingly important role across a broad ...
A fast method of order O(N) is proposed to calculate interaction energies and forces in molecular sy...
We are designing and developing the algorithms for molecular dynamics (MD) simulations with large sy...
The appropriate treatment of long-range Coulombic forces is an area of great interest in the biomole...
A number of problems arise when long-range forces, such as those governed by Bessel functions, are u...
For inhomogeneous systems with interfaces, the inclusion of long-range dispersion interactions is ne...
Long-range dispersion interactions have a critical influence on physical quantities in simulations o...
International audienceThe computation of long-range potentials is one of the demanding tasks in Mole...
Methods for performing large-scale parallel Molecular Dynamics(MD) simulations are investigated. A ...
We report the design and performance of a computational molecular dynamics (MD) code for 400 million...
For realistic modeling of materials, a molecular-dynamics (MD) algorithm is developed based on multi...
Based on a parallel scalable library for Coulomb interactions in particle systems, a comparison betw...
The Monte Carlo-Metropolis (MM) and Molecular Dynamics (MD) techniques are among the most popular ap...
For the purpose of molecular dynamics simulations of large biopolymers we have developed a new metho...
The simulation of classical particle systems by means of molecular dynamics techniques requires the ...
Computer simulations of complex particle systems play an increasingly important role across a broad ...
A fast method of order O(N) is proposed to calculate interaction energies and forces in molecular sy...
We are designing and developing the algorithms for molecular dynamics (MD) simulations with large sy...
The appropriate treatment of long-range Coulombic forces is an area of great interest in the biomole...
A number of problems arise when long-range forces, such as those governed by Bessel functions, are u...
For inhomogeneous systems with interfaces, the inclusion of long-range dispersion interactions is ne...
Long-range dispersion interactions have a critical influence on physical quantities in simulations o...
International audienceThe computation of long-range potentials is one of the demanding tasks in Mole...
Methods for performing large-scale parallel Molecular Dynamics(MD) simulations are investigated. A ...
We report the design and performance of a computational molecular dynamics (MD) code for 400 million...
For realistic modeling of materials, a molecular-dynamics (MD) algorithm is developed based on multi...
Based on a parallel scalable library for Coulomb interactions in particle systems, a comparison betw...
The Monte Carlo-Metropolis (MM) and Molecular Dynamics (MD) techniques are among the most popular ap...
For the purpose of molecular dynamics simulations of large biopolymers we have developed a new metho...
The simulation of classical particle systems by means of molecular dynamics techniques requires the ...