Supplementary File 1
- Smith, Christian T.
- Von Bargen, Jennifer
- DeHaan, Patrick W.
- Scheerer, Paul
- Meeuwig, Michael H.
Publication date
February 2019
DOIAbstract
Bash scripts used to handle raw sequence data, identify loci, and call genotypes
Bash scripts used to handle raw sequence data, identify loci, and call genotypes
Collection of scripts to process reads for the linkage mapping panel and assign genotypes in genepop...
A set of scripts to reproduce population genomic analyses of the Réunion harrier. Note that these sc...
Zipped folder containing genome assembly, genome annotation file, repeats file, SNP array data set a...
Bash scripts used to handle raw sequence data, identify loci, and call genotypes
This zip file contains three bash/shell scripts which are used to download files from GenBank, filte...
Bash shell and python scripts used to prepare alignments for gene tree inference, phase alleles, and...
Configuration files and bash scripts used in the following study: "The genotype-phenotype map of an ...
This repository compiles scripts that have been developed to analyse genomic data in manuscript BIOR...
Supplemental Data File 1: sequence alignments. Supplemental Data File 2: accessions of reference gen...
Script for RNASeq Analysis. This Word file contains a bash script to run the rsem mapping and differ...
These archive contains files needed to run simulations and analyses. Each file has genotype frequenc...
This file contains the series of bash commands used to filter uneak output to call genotypes using m...
RAD genotype data for the full set of 4,969 loci in genepop format. Sample names correspond to the ...
Scripts used for assembly, base calling, and orthology assessment of the Anchored Phylogenomics loci...
R and shell scripts to perform genome scan analyses. See README for details on how to use script
Collection of scripts to process reads for the linkage mapping panel and assign genotypes in genepop...
A set of scripts to reproduce population genomic analyses of the Réunion harrier. Note that these sc...
Zipped folder containing genome assembly, genome annotation file, repeats file, SNP array data set a...
Bash scripts used to handle raw sequence data, identify loci, and call genotypes
This zip file contains three bash/shell scripts which are used to download files from GenBank, filte...
Bash shell and python scripts used to prepare alignments for gene tree inference, phase alleles, and...
Configuration files and bash scripts used in the following study: "The genotype-phenotype map of an ...
This repository compiles scripts that have been developed to analyse genomic data in manuscript BIOR...
Supplemental Data File 1: sequence alignments. Supplemental Data File 2: accessions of reference gen...
Script for RNASeq Analysis. This Word file contains a bash script to run the rsem mapping and differ...
These archive contains files needed to run simulations and analyses. Each file has genotype frequenc...
This file contains the series of bash commands used to filter uneak output to call genotypes using m...
RAD genotype data for the full set of 4,969 loci in genepop format. Sample names correspond to the ...
Scripts used for assembly, base calling, and orthology assessment of the Anchored Phylogenomics loci...
R and shell scripts to perform genome scan analyses. See README for details on how to use script
Collection of scripts to process reads for the linkage mapping panel and assign genotypes in genepop...
A set of scripts to reproduce population genomic analyses of the Réunion harrier. Note that these sc...
Zipped folder containing genome assembly, genome annotation file, repeats file, SNP array data set a...
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