An archived folder containing the following files for each of the five datasets (g2, g5, g9, i37, and i57; example file names for the g5 dataset are given): concatenated alignment in fasta format (c2p1pgtc2_g5_combined_72inds_163seqs.fa), the RAxML tree from the concatenated alignment (RAxML_bipartitions.c2p1pgtc2_g5_combined_72inds_163seqs), the astral tree (c2p1pgts2_g5_astral.tre), and the list of included loci for each of the five datasets (c2p1gt2_Locus_List_g5.txt)
UCE contigs, alignments, trimmed alignments, coverage information, and configuration and log files u...
Part 5. tar.gz compressed folder containing: initial tree data for running R pipeline (data/) and a ...
FASTA file with the concatenated individual orthologous group alignments (409 total), with 94 taxa
An archived folder containing the following files for each of the individual loci (example file name...
Concatenated alignment of the complete dataset (1361 loci) and the inferred maximum likelihood RAxML...
Alignment matrices in FASTA format per individual marker and concatenated matrix for RAxML and MrBay...
Simulated data. The archive Simulated-data.tar.gz contains two folders called Alignments and Trees. ...
Concatenated alignments of 1636 loci for RAxML phylogenetic analysis of Gehyra nana and allied taxa
RAxML Analysis files for the 75% (75p) complete data set. Includes unpartitioned, partitioned, and ...
This zip file contains the supporting alignments and trees for the publication "Simultaneous radiati...
Tree files in NEWICK-format of all phylogenomic analyses conducted. See "6_Concatenated alignments" ...
Concatenated nucleotide alignments for 101 orthogroups used to estimate a species tree in RAxML. Thi...
This file contains: (1) unaligned sequences, (2) trimmed gene alignments, (3) supermatrix alignments...
Compressed (tar.gz) directory including 13 relaxed phylip format alignments and partition files used...
The Fig5_alignments folder contains a fasta format alignment gene alignments of the 6 SR and 2 PAR g...
UCE contigs, alignments, trimmed alignments, coverage information, and configuration and log files u...
Part 5. tar.gz compressed folder containing: initial tree data for running R pipeline (data/) and a ...
FASTA file with the concatenated individual orthologous group alignments (409 total), with 94 taxa
An archived folder containing the following files for each of the individual loci (example file name...
Concatenated alignment of the complete dataset (1361 loci) and the inferred maximum likelihood RAxML...
Alignment matrices in FASTA format per individual marker and concatenated matrix for RAxML and MrBay...
Simulated data. The archive Simulated-data.tar.gz contains two folders called Alignments and Trees. ...
Concatenated alignments of 1636 loci for RAxML phylogenetic analysis of Gehyra nana and allied taxa
RAxML Analysis files for the 75% (75p) complete data set. Includes unpartitioned, partitioned, and ...
This zip file contains the supporting alignments and trees for the publication "Simultaneous radiati...
Tree files in NEWICK-format of all phylogenomic analyses conducted. See "6_Concatenated alignments" ...
Concatenated nucleotide alignments for 101 orthogroups used to estimate a species tree in RAxML. Thi...
This file contains: (1) unaligned sequences, (2) trimmed gene alignments, (3) supermatrix alignments...
Compressed (tar.gz) directory including 13 relaxed phylip format alignments and partition files used...
The Fig5_alignments folder contains a fasta format alignment gene alignments of the 6 SR and 2 PAR g...
UCE contigs, alignments, trimmed alignments, coverage information, and configuration and log files u...
Part 5. tar.gz compressed folder containing: initial tree data for running R pipeline (data/) and a ...
FASTA file with the concatenated individual orthologous group alignments (409 total), with 94 taxa