A crucial step in the use of DNA markers for biodiversity surveys is the assignment of Linnaean taxonomies (species, genus, etc.) to sequence reads. This allows the use of all the information known based on the taxonomic names. Taxonomic placement of DNA barcoding sequences is inherently probabilistic because DNA sequences contain errors, because there is natural variation among sequences within a species, and because reference data bases are incomplete and can have false annotations. However, most existing bioinformatics methods for taxonomic placement either exclude uncertainty, or quantify it using metrics other than probability. In this paper we evaluate the performance of the recently proposed probabilistic taxonomic placement method P...
Accurate estimates of biodiversity are required for research in a broad array of biological subdisci...
Accurate estimates of biodiversity are required for research in a broad array of biological subdisci...
Motivation: When targeted to a barcoding region, high-throughput sequencing can be used to identify ...
A crucial step in the use of DNA markers for biodiversity surveys is the assignment of Linnaean taxo...
A crucial step in the use of DNA markers for biodiversity surveys is the assignment of Linnaean taxo...
A crucial step in the use of DNA markers for biodiversity surveys is the assignment of Linnaean taxo...
A crucial step in the use of DNA markers for biodiversity surveys is the assignment of Linnaean taxo...
A crucial step in the use of DNA markers for biodiversity surveys is the assignment of Linnaean taxo...
A crucial step in the use of DNA markers for biodiversity surveys is the assignment of Linnaean taxo...
Assessment of biodiversity using metabarcoding data, such as from bulk or environmental DNA sampling...
Assessment of biodiversity using metabarcoding data, such as from bulk or environmental DNA sampling...
International audienceThe DNA barcoding concept has considerably boosted taxonomy research by facili...
DNA barcoding can identify biological species and provides an important tool in diverse applications...
DNA barcoding can identify biological species and provides an important tool in diverse applications...
Motivation: When targeted to a barcoding region, high-throughput sequencing can be used to identify ...
Accurate estimates of biodiversity are required for research in a broad array of biological subdisci...
Accurate estimates of biodiversity are required for research in a broad array of biological subdisci...
Motivation: When targeted to a barcoding region, high-throughput sequencing can be used to identify ...
A crucial step in the use of DNA markers for biodiversity surveys is the assignment of Linnaean taxo...
A crucial step in the use of DNA markers for biodiversity surveys is the assignment of Linnaean taxo...
A crucial step in the use of DNA markers for biodiversity surveys is the assignment of Linnaean taxo...
A crucial step in the use of DNA markers for biodiversity surveys is the assignment of Linnaean taxo...
A crucial step in the use of DNA markers for biodiversity surveys is the assignment of Linnaean taxo...
A crucial step in the use of DNA markers for biodiversity surveys is the assignment of Linnaean taxo...
Assessment of biodiversity using metabarcoding data, such as from bulk or environmental DNA sampling...
Assessment of biodiversity using metabarcoding data, such as from bulk or environmental DNA sampling...
International audienceThe DNA barcoding concept has considerably boosted taxonomy research by facili...
DNA barcoding can identify biological species and provides an important tool in diverse applications...
DNA barcoding can identify biological species and provides an important tool in diverse applications...
Motivation: When targeted to a barcoding region, high-throughput sequencing can be used to identify ...
Accurate estimates of biodiversity are required for research in a broad array of biological subdisci...
Accurate estimates of biodiversity are required for research in a broad array of biological subdisci...
Motivation: When targeted to a barcoding region, high-throughput sequencing can be used to identify ...