Publication date
April 2017
DOIAbstract
Locus list for the dominance-coded data set with both non-paralogous and paralogous loci (in PLINK .map format)
Locus list for the dominance-coded data set with both non-paralogous and paralogous loci (in PLINK .map format)
Sequence capture loci (a.k.a. anchored phylogenomics data). The data are in Nexus format (partitione...
concatenated alignment of loci with complete taxon occupancy (no missing data) in PHYLIP format
Collection of scripts to process reads for the linkage mapping panel and assign genotypes in genepop...
non-delimited text file with Genotype data for dominance-coded genotypes at paralogous and non-paral...
Genotype data (in PLINK .ped format) for non-paralogous loci. For use with the non_paralogs.map fil...
File contains the Sequence ID and corresponding Map ID for loci used in the linkage map. The sequenc...
LocusNamingKey.xlsx provides a lookup table to convert locus names used in HapDipFemConsensus.linkag...
Tab-delimited text file giving the linkage group (LG) and cM (centiMorgan) position of each SNP. Th...
<p>List of model parameters for the locus where L is the total number of fine-mapping loci).</p
The algorithms that drive the map+ program for locus-oriented linkage mapping are presented. They de...
The 2497_indiv_5591_markers.map file is a file of marker names and positions, slightly amended from ...
A subset of the sequence capture loci that were captured for all species included in the study. The ...
File showing which loci refers to which 'bgc output number' for all 77 markers, only autosomal marke...
Contains scripts for paralogous loci filtering, output data from the *populations* program of *Stack...
This file is the input data file used for map construction in joinmap format (.loc) produced by the ...
Sequence capture loci (a.k.a. anchored phylogenomics data). The data are in Nexus format (partitione...
concatenated alignment of loci with complete taxon occupancy (no missing data) in PHYLIP format
Collection of scripts to process reads for the linkage mapping panel and assign genotypes in genepop...
non-delimited text file with Genotype data for dominance-coded genotypes at paralogous and non-paral...
Genotype data (in PLINK .ped format) for non-paralogous loci. For use with the non_paralogs.map fil...
File contains the Sequence ID and corresponding Map ID for loci used in the linkage map. The sequenc...
LocusNamingKey.xlsx provides a lookup table to convert locus names used in HapDipFemConsensus.linkag...
Tab-delimited text file giving the linkage group (LG) and cM (centiMorgan) position of each SNP. Th...
<p>List of model parameters for the locus where L is the total number of fine-mapping loci).</p
The algorithms that drive the map+ program for locus-oriented linkage mapping are presented. They de...
The 2497_indiv_5591_markers.map file is a file of marker names and positions, slightly amended from ...
A subset of the sequence capture loci that were captured for all species included in the study. The ...
File showing which loci refers to which 'bgc output number' for all 77 markers, only autosomal marke...
Contains scripts for paralogous loci filtering, output data from the *populations* program of *Stack...
This file is the input data file used for map construction in joinmap format (.loc) produced by the ...
Sequence capture loci (a.k.a. anchored phylogenomics data). The data are in Nexus format (partitione...
concatenated alignment of loci with complete taxon occupancy (no missing data) in PHYLIP format
Collection of scripts to process reads for the linkage mapping panel and assign genotypes in genepop...
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