The TRIM DHS data was generated from 145 cell types DHS data in ENCODE. And the methodology of DHS selection analysis was based on our previous DHS research(Comprehensive identification and analysis of human accelerated regulatory DNA, Rachel et al.Genome Research)
(A) The number of genes detected through scRNA-seq in each cell type. (B) GO analysis of DEGs in bul...
Mapping DNase I hypersensitive sites (DHSs) within nuclear chromatin is a traditional and powerful m...
Mapping DNase I hypersensitive sites (DHSs) within nuclear chromatin is a traditional and powerful m...
The top panel shows the raw DNase-seq data for 14 samples of 7 different cell lines (highlighted wit...
<p>The log of the DNase-seq signal intensity value, defined as the maximum parzen score (output of F...
<p>Human DHS gains show a high level of overlap to DHS regions identified in (a) three independently...
<p>DHS sites in cells shifted to 39°C in BM or OIM for 24 and 48hr (d1 and d2) were compared to cont...
<p>(a) Analysis pipeline. DNase-sequences from each species were aligned to the native genome and li...
<div><p>Mapping DNase I hypersensitive sites (DHSs) within nuclear chromatin is a traditional and po...
(A) Gene sets from the GSEA Immune Signatures Database (ImmuneSigDB) were used to interrogate log2FC...
New genotyping technologies are producing reliable results with far greater coverage and at dramatic...
The widespread and rapid adoption of high-throughput sequencing technologies has afforded researcher...
The widespread and rapid adoption of high-throughput sequencing technologies has afforded researcher...
New genotyping technologies are producing reliable results with far greater coverage and at dramatic...
Automated analysis of genomic data is a crucial problem in post-sequencing genome era. In this thesi...
(A) The number of genes detected through scRNA-seq in each cell type. (B) GO analysis of DEGs in bul...
Mapping DNase I hypersensitive sites (DHSs) within nuclear chromatin is a traditional and powerful m...
Mapping DNase I hypersensitive sites (DHSs) within nuclear chromatin is a traditional and powerful m...
The top panel shows the raw DNase-seq data for 14 samples of 7 different cell lines (highlighted wit...
<p>The log of the DNase-seq signal intensity value, defined as the maximum parzen score (output of F...
<p>Human DHS gains show a high level of overlap to DHS regions identified in (a) three independently...
<p>DHS sites in cells shifted to 39°C in BM or OIM for 24 and 48hr (d1 and d2) were compared to cont...
<p>(a) Analysis pipeline. DNase-sequences from each species were aligned to the native genome and li...
<div><p>Mapping DNase I hypersensitive sites (DHSs) within nuclear chromatin is a traditional and po...
(A) Gene sets from the GSEA Immune Signatures Database (ImmuneSigDB) were used to interrogate log2FC...
New genotyping technologies are producing reliable results with far greater coverage and at dramatic...
The widespread and rapid adoption of high-throughput sequencing technologies has afforded researcher...
The widespread and rapid adoption of high-throughput sequencing technologies has afforded researcher...
New genotyping technologies are producing reliable results with far greater coverage and at dramatic...
Automated analysis of genomic data is a crucial problem in post-sequencing genome era. In this thesi...
(A) The number of genes detected through scRNA-seq in each cell type. (B) GO analysis of DEGs in bul...
Mapping DNase I hypersensitive sites (DHSs) within nuclear chromatin is a traditional and powerful m...
Mapping DNase I hypersensitive sites (DHSs) within nuclear chromatin is a traditional and powerful m...
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