This file contains all the bacterial taxa (OTU = operational taxonomic unit of bacteria) that we could sequence on brown trout egg samples in our study. This file is used to work with QIIME. There is a parallel file to this one that contains all the metadata (map file)
OTU table as a text file created from sequencing performed by Molecular Research DNA, Shallowater, T...
Processed raw data clustered into Operational Taxonomic units in the QIIME, OCTUPUS, and AmpliconNoi...
Table of OTUs (rows) by sample (columns) after bioinformatics pipeline. See "OTUs fasta file" for re...
This file contains all metadata to the OTU file, used with QIIME. it explains what the brown trout e...
OTUtable with OTUs generated during this study. For each sample, sequence ID matching that of Supple...
Bacterial metadata with OTU assignments, taxonomy, and environmental classification. The code used t...
Taxonomic assignments of OTUs (binned at 97% 16S rRNA gene sequence identity), generated by comparin...
Metadata including flower or bird ID and flower treatment for bacterial community data (OTU table)
<p>An OTU represents a cluster of sequences with 97% similarity in the sequence of the 18S rRNA V4 r...
Contains taxonomic information and 16S rRNA sequence similarity % for every Otu in Otu_table
Number of sequences of each Operational Taxonomic Units (OTUs) recovered from stomach content analys...
File Piper_bacterialOTU_taxonomy This file summarizes the taxonomy of bacterial OTUs observed in thi...
<p>Abbreviations: OTU, operational taxonomic units; Classification indicates the taxonomical affilia...
Additional file 1: BIOM-File S1. Final operational taxonomic unit (OTU) table in BIOM format, format...
Following 454 sequencing of the 16s rRNA gene of bacterial communities of 33 samples of attine ants,...
OTU table as a text file created from sequencing performed by Molecular Research DNA, Shallowater, T...
Processed raw data clustered into Operational Taxonomic units in the QIIME, OCTUPUS, and AmpliconNoi...
Table of OTUs (rows) by sample (columns) after bioinformatics pipeline. See "OTUs fasta file" for re...
This file contains all metadata to the OTU file, used with QIIME. it explains what the brown trout e...
OTUtable with OTUs generated during this study. For each sample, sequence ID matching that of Supple...
Bacterial metadata with OTU assignments, taxonomy, and environmental classification. The code used t...
Taxonomic assignments of OTUs (binned at 97% 16S rRNA gene sequence identity), generated by comparin...
Metadata including flower or bird ID and flower treatment for bacterial community data (OTU table)
<p>An OTU represents a cluster of sequences with 97% similarity in the sequence of the 18S rRNA V4 r...
Contains taxonomic information and 16S rRNA sequence similarity % for every Otu in Otu_table
Number of sequences of each Operational Taxonomic Units (OTUs) recovered from stomach content analys...
File Piper_bacterialOTU_taxonomy This file summarizes the taxonomy of bacterial OTUs observed in thi...
<p>Abbreviations: OTU, operational taxonomic units; Classification indicates the taxonomical affilia...
Additional file 1: BIOM-File S1. Final operational taxonomic unit (OTU) table in BIOM format, format...
Following 454 sequencing of the 16s rRNA gene of bacterial communities of 33 samples of attine ants,...
OTU table as a text file created from sequencing performed by Molecular Research DNA, Shallowater, T...
Processed raw data clustered into Operational Taxonomic units in the QIIME, OCTUPUS, and AmpliconNoi...
Table of OTUs (rows) by sample (columns) after bioinformatics pipeline. See "OTUs fasta file" for re...
DOI
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