Blast Descriptions for contigs from Dipodomys spectabilis kidney transcriptome assembly
- Marra, Nicholas J.
- Romero, Andrea
- DeWoody, J. Andrew
Publication date
April 2014
DOIAbstract
These are the preliminary blast descriptions for contigs from the combined assembly of 454 and Illumina reads pooled from 4 individual Dipodomys spectabilis kidney libraries. Descriptions are from a BLASTx search of the Swiss-Prot database at e<1x10^-6. The combined assembly was conducted in gsAssembler version 2.6 and contigs that were smaller than 100 bp have been removed. This accounts for the gaps in contig names (e.g. contig 2 from the gsAssembler asembly was 35 bp long and removed prior to blast annotation so the first two contigs are contig 1 and contig 3)
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